Mp2g12330



Description

Annotation

Database ID Description
KEGG K09273 UBTF; upstream-binding transcription factor
KOG KOG0527 HMG-box transcription factor; C-term missing; [K]
KOG KOG0381 HMG box-containing protein; [R]
KOG KOG0526 Nucleosome-binding factor SPN, POB3 subunit; N-term missing; [KLB]
CDD cd01390 HMGB-UBF_HMG-box
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.30.10 DNA Binding (I)
Pfam PF00505 HMG (high mobility group) box
SUPERFAMILY SSF47095 HMG-box
ProSiteProfiles PS50118 HMG boxes A and B DNA-binding domains profile.
Coils Coil Coil
PANTHER PTHR46912:SF1 HIGH MOBILITY GROUP B PROTEIN 13
PANTHER PTHR46912 HIGH MOBILITY GROUP B PROTEIN 13
CDD cd00084 HMG-box
SMART SM00398 hmgende2
GO GO:0003677 DNA binding
MapolyID Mapoly0026s0138 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHMGBOX2 transcription factor, HMG-box Published

Transcript models

Transcript ID Location Sequences Extract region
Mp2g12330.1 chr2:12583981..12587380 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.