Mp3g18380



Description

Annotation

Database ID Description
KEGG K08500 SYP6; syntaxin of plants SYP6
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
Gene3D G3DSA:1.20.5.110 -
SUPERFAMILY SSF47661 t-snare proteins
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF58038 SNARE fusion complex
Gene3D G3DSA:1.20.58.90 -
SMART SM00397 tSNARE_6
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
CDD cd15841 SNARE_Qc
Coils Coil Coil
PANTHER PTHR19957:SF224 SYNTAXIN-61
Pfam PF09177 Syntaxin 6, N-terminal
PANTHER PTHR19957 SYNTAXIN
GO GO:0016192 vesicle-mediated transport
GO GO:0048193 Golgi vesicle transport
GO GO:0016020 membrane
MapolyID Mapoly0140s0004 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP6A Ortholog of Arabidopsis SYP61 gene Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g18380.1 chr3:18670108..18674028 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.