Mp4g11820



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF54277 CAD & PB1 domains
Pfam PF02362 B3 DNA binding domain
Gene3D G3DSA:2.40.330.10 -
Pfam PF02309 AUX/IAA family
SMART SM01019 B3_2
ProSiteProfiles PS51745 PB1 domain profile.
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
Gene3D G3DSA:2.30.30.1040 -
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
Pfam PF06507 Auxin response factor
Gene3D G3DSA:3.10.20.90 -
CDD cd10017 B3_DNA
PANTHER PTHR31384 AUXIN RESPONSE FACTOR 4-RELATED
PANTHER PTHR31384:SF102 AUXIN RESPONSE FACTOR 4
GO GO:0005634 nucleus
GO GO:0009725 response to hormone
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0005515 protein binding
MapolyID Mapoly0011s0167 -

Nomenclature

Gene symbol Product Transcript ID Status
MpARF2 Transcriptiion factor, similarity to Arabidopsis repressor ARFs. Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g11820.1 chr4:13070480..13077062 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.