Mp4g12490



Description

Annotation

Database ID Description
KOG KOG0014 MADS box transcription factor; [K]
SMART SM00432 madsneu2
Gene3D G3DSA:3.40.1810.10 -
ProSitePatterns PS00350 MADS-box domain signature.
CDD cd00265 MADS_MEF2_like
Pfam PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain)
ProSiteProfiles PS51297 K-box domain profile.
SUPERFAMILY SSF55455 SRF-like
PANTHER PTHR48019 SERUM RESPONSE FACTOR HOMOLOG
PANTHER PTHR48019:SF12 AGAMOUS-LIKE MADS-BOX PROTEIN AGL65 ISOFORM X1
Coils Coil Coil
ProSiteProfiles PS50066 MADS-box domain profile.
PRINTS PR00404 MADS domain signature
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus
GO GO:0046983 protein dimerization activity
GO GO:0003677 DNA binding
GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0045944 positive regulation of transcription by RNA polymerase II
MapolyID Mapoly0174s0011 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMADS1 transcription factor, MIKC-type MADS-box protein 1 Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12490.1 chr4:13974068..13978616 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.