Mp5g00440



Description

Annotation

Database ID Description
Pfam PF01535 PPR repeat
Pfam PF13041 PPR repeat family
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Pfam PF13812 Pentatricopeptide repeat domain
Pfam PF17177 Pentacotripeptide-repeat region of PRORP
Gene3D G3DSA:1.25.40.10 -
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain
SUPERFAMILY SSF48452 TPR-like
PANTHER PTHR47941 PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL
GO GO:0005515 protein binding
MapolyID Mapoly0078s0043 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_48 Pentatricopeptide repeat proteins Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g00440.1 chr5:666268..672122 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g00440.2 chr5:666851..672122 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.