Mp5g01600



Description

Annotation

Database ID Description
KOG KOG0773 Transcription factor MEIS1 and related HOX domain proteins; [K]
PANTHER PTHR11850:SF288 HOMEOBOX PROTEIN SHOOT MERISTEMLESS
SMART SM00389 HOX_1
Gene3D G3DSA:1.10.10.60 -
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS50071 'Homeobox' domain profile.
Coils Coil Coil
Pfam PF05920 Homeobox KN domain
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0175s0020 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD20 transcription factor, HD, homeodomain protein Published
MpKNOX1 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g01600.1 chr5:2197559..2202465 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.