Mp5g11100



Description

Annotation

Database ID Description
CDD cd00018 AP2
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF13891 Potential DNA-binding domain
ProSiteProfiles PS51032 AP2/ERF domain profile.
Pfam PF02362 B3 DNA binding domain
SUPERFAMILY SSF54171 DNA-binding domain
SMART SM00380 rav1_2
PRINTS PR00367 Ethylene responsive element binding protein signature
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
Pfam PF05641 Agenet domain
CDD cd10017 B3_DNA
Gene3D G3DSA:3.30.730.10 -
SMART SM01019 B3_2
PANTHER PTHR31677:SF162 ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4
Gene3D G3DSA:2.40.330.10 -
PANTHER PTHR31677 AP2 DOMAIN CLASS TRANSCRIPTION FACTOR
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
Pfam PF00847 AP2 domain
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0093s0032 -

Nomenclature

Gene symbol Product Transcript ID Status
MpAP2B3-2 transcription factor, AP2-B3 Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g11100.1 chr5:12413203..12422975 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.