Mp7g12900



Description

Annotation

Database ID Description
KEGG K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
PANTHER PTHR47931 OS01G0228400 PROTEIN
PANTHER PTHR47931:SF2 OS01G0228400 PROTEIN
Pfam PF13041 PPR repeat family
Pfam PF13812 Pentatricopeptide repeat domain
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain
Gene3D G3DSA:1.25.40.10 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF12854 PPR repeat
SUPERFAMILY SSF57756 Retrovirus zinc finger-like domains
Pfam PF01535 PPR repeat
ProSiteProfiles PS50158 Zinc finger CCHC-type profile.
GO GO:0003676 nucleic acid binding
GO GO:0005515 protein binding
GO GO:0008270 zinc ion binding
MapolyID Mapoly0003s0298 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_8 Pentatricopeptide repeat proteins Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g12900.1 chr7:14221548..14226107 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g12900.2 chr7:14221548..14226107 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.