Mp7g17410



Description

Annotation

Database ID Description
KOG KOG0266 WD40 repeat-containing protein; [R]
KOG KOG0293 WD40 repeat-containing protein; C-term missing; [S]
Gene3D G3DSA:2.130.10.10 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like
PANTHER PTHR44083 TOPLESS-RELATED PROTEIN 1-RELATED
PANTHER PTHR44083:SF35 TOPLESS-RELATED PROTEIN 1-LIKE ISOFORM X1
SMART SM00667 Lish
ProSiteProfiles PS50896 LIS1 homology (LisH) motif profile.
CDD cd00200 WD40
SMART SM00668 ctlh
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
SMART SM00320 WD40_4
Pfam PF00400 WD domain, G-beta repeat
ProSiteProfiles PS50897 C-terminal to LisH (CTLH) motif profile.
SUPERFAMILY SSF50978 WD40 repeat-like
GO GO:0005515 protein binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0051s0078 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTPL Protein binding Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g17410.1 chr7:19383390..19393946 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.