Mp8g04400



Description

Annotation

Database ID Description
KEGG K08065 NFYB, HAP3; nuclear transcription Y subunit beta
KOG KOG0869 CCAAT-binding factor, subunit A (HAP3); [K]
PRINTS PR00615 CCAAT-binding transcription factor subunit A signature
Gene3D G3DSA:1.10.20.10 Histone
PANTHER PTHR11064:SF129 NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00685 NF-YB/HAP3 subunit signature.
PANTHER PTHR11064 CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
Pfam PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
SUPERFAMILY SSF47113 Histone-fold
GO GO:0005634 nucleus
GO GO:0043565 sequence-specific DNA binding
GO GO:0016602 CCAAT-binding factor complex
GO GO:0046982 protein heterodimerization activity
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
MapolyID Mapoly0216s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCCAAT-NFYB2 transcription factor, CCAAT-NFYB Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g04400.1 chr8:4946336..4949380 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.2 chr8:4946336..4949406 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.3 chr8:4946336..4949359 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.4 chr8:4946336..4948918 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.