MpVg00300



Description

Annotation

Database ID Description
Pfam PF06203 CCT motif
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
SMART SM00979 tify_2
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51017 CCT domain profile.
ProSiteProfiles PS51320 Tify domain profile.
SMART SM00401 GATA_3
Gene3D G3DSA:3.30.50.10 -
Pfam PF06200 tify domain
PANTHER PTHR46125:SF5 GATA TRANSCRIPTION FACTOR 28
ProSitePatterns PS00344 GATA-type zinc finger domain.
CDD cd00202 ZnF_GATA
Pfam PF00320 GATA zinc finger
PANTHER PTHR46125 GATA TRANSCRIPTION FACTOR 28
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
GO GO:0008270 zinc ion binding
GO GO:0043565 sequence-specific DNA binding
GO GO:0005515 protein binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID MapolyY_B0021 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA6 transcription factor, GATA Published

Transcript models

Transcript ID Location Sequences Extract region
MpVg00300.1 chrV:1475386..1502156 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00300.2 chrV:1475386..1502156 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.