MpVg00340



Description

Annotation

Database ID Description
KEGG K13422 MYC2; transcription factor MYC2
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
Pfam PF14215 bHLH-MYC and R2R3-MYB transcription factors N-terminal
SMART SM00353 finulus
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
PANTHER PTHR11514 MYC
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
CDD cd11449 bHLH_AtAIB_like
Gene3D G3DSA:4.10.280.10 HLH
Pfam PF00010 Helix-loop-helix DNA-binding domain
GO GO:0046983 protein dimerization activity
MapolyID MapolyY_B0018 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH46 transcription factor, bHLH Published
MpMYCY MYC transcription factor Published

Transcript models

Transcript ID Location Sequences Extract region
MpVg00340.1 chrV:1627488..1660268 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00340.2 chrV:1627193..1660295 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00340.3 chrV:1627193..1660295 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.