PPR repeat // PPR repeat family // Pentatricopeptide repeat domain
Database | ID | Description |
---|---|---|
PFAM | PF13812 | Pentatricopeptide repeat domain |
PANTHER | PTHR24015:SF432 | |
PFAM | PF01535 | PPR repeat |
PANTHER | PTHR24015 | FAMILY NOT NAMED |
PFAM | PF13041 | PPR repeat family |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpPPR_16 | Pentatricopeptide repeat proteins | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0019s0086.1 CGAGGTGAGA GACGAATTCA TCATCCGACA CTTGTTCTTG TCGACAGTGT GTGGCAGCGT AGCAGCCAGC AAGCAGCTAT TGGGGTATGT CGAGAGAAAG CGGCTTCTGG CATGTGTCGC CCACACCGGA GATGAATGAC AATGTCGCAG GCCACGCAGT CAGTTTCTGG GAGATGAGAA AAGGATGGAA AGCCAGAATT TTTGGAGTGT TCATTGCTCC CATTCTTTCT GACACGATAT TTAAAGGATC ATTCTGGCCC TCCGAATTCG GCGTGGGATT CAAGGGAGAA TCCTCCTAGT GTTCACAATT CAATCCATCG TTCAGGACCT GCCTGCTTCT CTGGATTCTG GGATTCGAAA ATTTCGTCGA GGAGGAGTGC TGCGTGGGAT TCTTTGATGC AAATTGTAGC GAAGATTCTG TGGGAGAAGT TACTACTTTC GGAATGCAAT CTCAGTGTTT TGTGTTGCTC GAGCCCAATT GCATCCGAAC GGTGGAGAGG ACGCGGAGCA CAAGCCAAGC CGGAGATTGT GGGGTCTCCT TTGTATCGGA GACTTGTTTA TCAGCCGGAA GTACTAGGTA TGGGAGTTTC AAACATTCCA AATTTCACCT GTCGGATTCC TGGATGCAGC ATCCTCTCTT GTGTTCCTCG AATTTGACAC CAACTAGCCA ATCTCTGCGG TGGAATCCGA TGGGATTGTG CGTAGGTTCC AGTTCTCTTC TGGCCTGCTC GTCTTCTATA GCTTTTCGAG ACCACAGCCT GCTTGTGTTA GGTGCGTCTG CCTCCTTGCA GTTAACCTTA TTTTGTTTAC GTACTGAGAA TTCCTACCCT TCTCCCGCAC CTCCTAGAAG ACAATCCTTA CGACTAGTGC AGCAGCCTAG AGAGCAGTCT TCATTTCCCC CCGAAGCCCT TGCCAAGTCG ACAATTATCA CATCTGGCGA CGAAGATTAT GATAGTATTG AGGAAAGGCT TTTGAGAGCA TTAAAAGAAA GGAGAACAGA GGATGCTTGG CAGTTGCACC AGGTTTTGCG GAGGGGAGGG ATTTTACCTT CGCAAACGTG CTGTAGTAGG TTGATTGCTC AACTGTCTCA CAAAGGCACC CCTTCCAGCC TTTCACGAGC TCAAAAGATG TTAGTCGATC TGCAGTCGGT AAACAAGGTT TCTCTTCTAG ATGCCGATGC CATGGGATTG CTGGTCATGG CATCTGCTCG CGCAGGAGCT GCACGATATG CTCTCAGCAT CACAAGGGTG ATGCTTCAAA TGGGATTCCT TCCGCCCGTA AAAGTTTGGA GTGCTGTTGT TAGTCGTCTT GGAAAGCACC CGTATGATGC CACTTTGGCT CTCGAATTGT TCGATGAAAT ATGTGACCTG ACTGCATTAG AGGTGGAGAG TGGTAACGAG AGTAGCGAAG GAAATTCTGA CTTGGATGTT GTATCATCGA ATTTTGTGAA TGGGCGAAGA ATTGTAACTC AGGACCCAGT AGGTATTAGA CCAGACACCG GTGCATTCAA CGCCGTTCTA AATGCCTGCG CAACAGGGGC ACTGGCAAAG AAGGCGGAAG AATATGTGGA GCGTATGGCG GAATTTGGAG TTCGGCCGGA TGTTCTGACT TTTAATATTC TAATAAAACT TTTTGCCAAG ACAGGGGAAG CTAACCAGCT GCTGAACATT CTTGAGCAAA TGGAGGAACA TTCGATCGAA CCTGACATAT CCACCTTAAA TTCACTAGTC TCTGCGTACA CGGCCCTCGG CCATTTAGAC GAGGCTGAGC GATTAGTTCA CTCCATGCAG CAAGCAGCAG GTCAAACACG AAATTCAAAC AATAGTGGGG ACTGTGCAAG CCAGCTGGAA GAGCATCGTG TTGTCGGCAA GGTGTCCCCG TGGGTAGAGA GAATCACTAG GGGATACGAG GGAGCAGAGG AAGTTGAAAA GACAGGTAAG GGAAGTAGGT CACTTCAAGC TAGGTGGAAA AATATTGTGA AGCCTGACGT ACGCACGTAC ACGACATTGA TGAACGGGTA CGTGAAGAAA GGTAGAATGA AAGATGCTGT TCAGCTTCTC ATTGCTATGC GGAATGAGGA AGATGCCAGG AGCCACCCTA ACGAAGTAAC TTACACCACT GTAATTGGAG CTTGCGTCAG CTTGGGACTC ATGGACGAAG CAAGGAGTGT TTTACTTGAA ATGGCAGTTC AAAAGGTACC TGCAAATCTT GTGACTTACA ATACCTTGCT GAAGGGGTAT TGCAGGGCGG GGCAGCTTTC TAAGGCCTAT GAACTGATGA AAGACATGAA AGTAGCAGGT CTTTCACCAG ACGTGGTGTC CTACAATACC CTGATAAACG GTTGCATCCG AAGGGATGAC AATGTTGATG CCCTGGAAGT ATTTCGAGAG ATGAGGAGTG CGGGCATTGC TCCATCTGAG GTTAGTTACA CGACTCTCAT GAATGCTTTT GCAAGAAATG GACAGCCAAA ACTGGTGGCG GAGGTCTTCG AGGAGATGAA GCAGGATCCG TGGATGCGAG TCGATGTAAT CGCCTGGAAC GTTCTGATCG ACGGGTATTG TAGGGCTGGG ATGATGGATG AGGCCAAAGA TAACTTCACT GAGATGAAGG AGCAAGGGTT CCATCCTACT GTGGCAACTT ATGGGAGTCT GGTGAAGGGG TACGCATCAG CCGGTCAGGC TGGTGAAGCT TTAGTCATAT GGAAAGAGAT TCAAGAAAGA GTATTGGCCA AGAAAGGGGA TGAAGTTCAG CCACTTGAGC CAGATGGAGG GCTCTTTGAC TGTCTAGTGG ACACATGTGT TAGAGCGGGG TATTTTCAAA GAGCTCTGGA AGTGGTTGCT TGCATGGAGC AGCAAGGCAT TTTAGCTGAT AAGGTCAAGT ACAAACGCAT GTTCATTGAG CTGTATTCTA ACTTGTACAC GAGCCAACAT GCATCAGCTA AGAGGCGAGC AAAATCTGCA GACAAGCGGA AAGCCGTCGA TGCATTTAAA TTTTGGCTGG GACTCCCAAA TCAGTACTAC CAAACTGATT GGACGCCATA ATGCCGTACG AAGGGTAAAG ATCATCAACT GATCTTAGCC GCTACCCTGT AGAAGTCCTT GT |
mRNA UTR + CDS |
>Mapoly0019s0086.1 CGAGGTGAGA GACGAATTCA TCATCCGACA CTTGTTCTTG TCGACAGTGT GTGGCAGCGT AGCAGCCAGC AAGCAGCTAT TGGGGTATGT CGAGAGAAAG CGGCTTCTGG CATGTGTCGC CCACACCGGA GATGAATGAC AATGTCGCAG GCCACGCAGT CAGTTTCTGG GAGATGAGAA AAGGATGGAA AGCCAGAATT TTTGGAGTGT TCATTGCTCC CATTCTTTCT GACACGATAT TTAAAGGATC ATTCTGGCCC TCCGAATTCG GCGTGGGATT CAAGGGAGAA TCCTCCTAGT GTTCACAATT CAATCCATCG TTCAGGACCT GCCTGCTTCT CTGGATTCTG GGATTCGAAA ATTTCGTCGA GGAGGAGTGC TGCGTGGGAT TCTTTGATGC AAATTGTAGC GAAGATTCTG TGGGAGAAGT TACTACTTTC GGAATGCAAT CTCAGTGTTT TGTGTTGCTC GAGCCCAATT GCATCCGAAC GGTGGAGAGG ACGCGGAGCA CAAGCCAAGC CGGAGATTGT GGGGTCTCCT TTGTATCGGA GACTTGTTTA TCAGCCGGAA GTACTAGGTA TGGGAGTTTC AAACATTCCA AATTTCACCT GTCGGATTCC TGGATGCAGC ATCCTCTCTT GTGTTCCTCG AATTTGACAC CAACTAGCCA ATCTCTGCGG TGGAATCCGA TGGGATTGTG CGTAGGTTCC AGTTCTCTTC TGGCCTGCTC GTCTTCTATA GCTTTTCGAG ACCACAGCCT GCTTGTGTTA GGTGCGTCTG CCTCCTTGCA GTTAACCTTA TTTTGTTTAC GTACTGAGAA TTCCTACCCT TCTCCCGCAC CTCCTAGAAG ACAATCCTTA CGACTAGTGC AGCAGCCTAG AGAGCAGTCT TCATTTCCCC CCGAAGCCCT TGCCAAGTCG ACAATTATCA CATCTGGCGA CGAAGATTAT GATAGTATTG AGGAAAGGCT TTTGAGAGCA TTAAAAGAAA GGAGAACAGA GGATGCTTGG CAGTTGCACC AGGTTTTGCG GAGGGGAGGG ATTTTACCTT CGCAAACGTG CTGTAGTAGG TTGATTGCTC AACTGTCTCA CAAAGGCACC CCTTCCAGCC TTTCACGAGC TCAAAAGATG TTAGTCGATC TGCAGTCGGT AAACAAGGTT TCTCTTCTAG ATGCCGATGC CATGGGATTG CTGGTCATGG CATCTGCTCG CGCAGGAGCT GCACGATATG CTCTCAGCAT CACAAGGGTG ATGCTTCAAA TGGGATTCCT TCCGCCCGTA AAAGTTTGGA GTGCTGTTGT TAGTCGTCTT GGAAAGCACC CGTATGATGC CACTTTGGCT CTCGAATTGT TCGATGAAAT ATGTGACCTG ACTGCATTAG AGGTGGAGAG TGGTAACGAG AGTAGCGAAG GAAATTCTGA CTTGGATGTT GTATCATCGA ATTTTGTGAA TGGGCGAAGA ATTGTAACTC AGGACCCAGT AGGTATTAGA CCAGACACCG GTGCATTCAA CGCCGTTCTA AATGCCTGCG CAACAGGGGC ACTGGCAAAG AAGGCGGAAG AATATGTGGA GCGTATGGCG GAATTTGGAG TTCGGCCGGA TGTTCTGACT TTTAATATTC TAATAAAACT TTTTGCCAAG ACAGGGGAAG CTAACCAGCT GCTGAACATT CTTGAGCAAA TGGAGGAACA TTCGATCGAA CCTGACATAT CCACCTTAAA TTCACTAGTC TCTGCGTACA CGGCCCTCGG CCATTTAGAC GAGGCTGAGC GATTAGTTCA CTCCATGCAG CAAGCAGCAG GTCAAACACG AAATTCAAAC AATAGTGGGG ACTGTGCAAG CCAGCTGGAA GAGCATCGTG TTGTCGGCAA GGTGTCCCCG TGGGTAGAGA GAATCACTAG GGGATACGAG GGAGCAGAGG AAGTTGAAAA GACAGGTAAG GGAAGTAGGT CACTTCAAGC TAGGTGGAAA AATATTGTGA AGCCTGACGT ACGCACGTAC ACGACATTGA TGAACGGGTA CGTGAAGAAA GGTAGAATGA AAGATGCTGT TCAGCTTCTC ATTGCTATGC GGAATGAGGA AGATGCCAGG AGCCACCCTA ACGAAGTAAC TTACACCACT GTAATTGGAG CTTGCGTCAG CTTGGGACTC ATGGACGAAG CAAGGAGTGT TTTACTTGAA ATGGCAGTTC AAAAGGTACC TGCAAATCTT GTGACTTACA ATACCTTGCT GAAGGGGTAT TGCAGGGCGG GGCAGCTTTC TAAGGCCTAT GAACTGATGA AAGACATGAA AGTAGCAGGT CTTTCACCAG ACGTGGTGTC CTACAATACC CTGATAAACG GTTGCATCCG AAGGGATGAC AATGTTGATG CCCTGGAAGT ATTTCGAGAG ATGAGGAGTG CGGGCATTGC TCCATCTGAG GTTAGTTACA CGACTCTCAT GAATGCTTTT GCAAGAAATG GACAGCCAAA ACTGGTGGCG GAGGTCTTCG AGGAGATGAA GCAGGATCCG TGGATGCGAG TCGATGTAAT CGCCTGGAAC GTTCTGATCG ACGGGTATTG TAGGGCTGGG ATGATGGATG AGGCCAAAGA TAACTTCACT GAGATGAAGG AGCAAGGGTT CCATCCTACT GTGGCAACTT ATGGGAGTCT GGTGAAGGGG TACGCATCAG CCGGTCAGGC TGGTGAAGCT TTAGTCATAT GGAAAGAGAT TCAAGAAAGA GTATTGGCCA AGAAAGGGGA TGAAGTTCAG CCACTTGAGC CAGATGGAGG GCTCTTTGAC TGTCTAGTGG ACACATGTGT TAGAGCGGGG TATTTTCAAA GAGCTCTGGA AGTGGTTGCT TGCATGGAGC AGCAAGGCAT TTTAGCTGAT AAGGTCAAGT ACAAACGCAT GTTCATTGAG CTGTATTCTA ACTTGTACAC GAGCCAACAT GCATCAGCTA AGAGGCGAGC AAAATCTGCA GACAAGCGGA AAGCCGTCGA TGCATTTAAA TTTTGGCTGG GACTCCCAAA TCAGTACTAC CAAACTGATT GGACGCCATA ATGCCGTACG AAGGGTAAAG ATCATCAACT GATCTTAGCC GCTACCCTGT AGAAGTCCTT GT |
CDS |
>Mapoly0019s0086.1 ATGCAATCTC AGTGTTTTGT GTTGCTCGAG CCCAATTGCA TCCGAACGGT GGAGAGGACG CGGAGCACAA GCCAAGCCGG AGATTGTGGG GTCTCCTTTG TATCGGAGAC TTGTTTATCA GCCGGAAGTA CTAGGTATGG GAGTTTCAAA CATTCCAAAT TTCACCTGTC GGATTCCTGG ATGCAGCATC CTCTCTTGTG TTCCTCGAAT TTGACACCAA CTAGCCAATC TCTGCGGTGG AATCCGATGG GATTGTGCGT AGGTTCCAGT TCTCTTCTGG CCTGCTCGTC TTCTATAGCT TTTCGAGACC ACAGCCTGCT TGTGTTAGGT GCGTCTGCCT CCTTGCAGTT AACCTTATTT TGTTTACGTA CTGAGAATTC CTACCCTTCT CCCGCACCTC CTAGAAGACA ATCCTTACGA CTAGTGCAGC AGCCTAGAGA GCAGTCTTCA TTTCCCCCCG AAGCCCTTGC CAAGTCGACA ATTATCACAT CTGGCGACGA AGATTATGAT AGTATTGAGG AAAGGCTTTT GAGAGCATTA AAAGAAAGGA GAACAGAGGA TGCTTGGCAG TTGCACCAGG TTTTGCGGAG GGGAGGGATT TTACCTTCGC AAACGTGCTG TAGTAGGTTG ATTGCTCAAC TGTCTCACAA AGGCACCCCT TCCAGCCTTT CACGAGCTCA AAAGATGTTA GTCGATCTGC AGTCGGTAAA CAAGGTTTCT CTTCTAGATG CCGATGCCAT GGGATTGCTG GTCATGGCAT CTGCTCGCGC AGGAGCTGCA CGATATGCTC TCAGCATCAC AAGGGTGATG CTTCAAATGG GATTCCTTCC GCCCGTAAAA GTTTGGAGTG CTGTTGTTAG TCGTCTTGGA AAGCACCCGT ATGATGCCAC TTTGGCTCTC GAATTGTTCG ATGAAATATG TGACCTGACT GCATTAGAGG TGGAGAGTGG TAACGAGAGT AGCGAAGGAA ATTCTGACTT GGATGTTGTA TCATCGAATT TTGTGAATGG GCGAAGAATT GTAACTCAGG ACCCAGTAGG TATTAGACCA GACACCGGTG CATTCAACGC CGTTCTAAAT GCCTGCGCAA CAGGGGCACT GGCAAAGAAG GCGGAAGAAT ATGTGGAGCG TATGGCGGAA TTTGGAGTTC GGCCGGATGT TCTGACTTTT AATATTCTAA TAAAACTTTT TGCCAAGACA GGGGAAGCTA ACCAGCTGCT GAACATTCTT GAGCAAATGG AGGAACATTC GATCGAACCT GACATATCCA CCTTAAATTC ACTAGTCTCT GCGTACACGG CCCTCGGCCA TTTAGACGAG GCTGAGCGAT TAGTTCACTC CATGCAGCAA GCAGCAGGTC AAACACGAAA TTCAAACAAT AGTGGGGACT GTGCAAGCCA GCTGGAAGAG CATCGTGTTG TCGGCAAGGT GTCCCCGTGG GTAGAGAGAA TCACTAGGGG ATACGAGGGA GCAGAGGAAG TTGAAAAGAC AGGTAAGGGA AGTAGGTCAC TTCAAGCTAG GTGGAAAAAT ATTGTGAAGC CTGACGTACG CACGTACACG ACATTGATGA ACGGGTACGT GAAGAAAGGT AGAATGAAAG ATGCTGTTCA GCTTCTCATT GCTATGCGGA ATGAGGAAGA TGCCAGGAGC CACCCTAACG AAGTAACTTA CACCACTGTA ATTGGAGCTT GCGTCAGCTT GGGACTCATG GACGAAGCAA GGAGTGTTTT ACTTGAAATG GCAGTTCAAA AGGTACCTGC AAATCTTGTG ACTTACAATA CCTTGCTGAA GGGGTATTGC AGGGCGGGGC AGCTTTCTAA GGCCTATGAA CTGATGAAAG ACATGAAAGT AGCAGGTCTT TCACCAGACG TGGTGTCCTA CAATACCCTG ATAAACGGTT GCATCCGAAG GGATGACAAT GTTGATGCCC TGGAAGTATT TCGAGAGATG AGGAGTGCGG GCATTGCTCC ATCTGAGGTT AGTTACACGA CTCTCATGAA TGCTTTTGCA AGAAATGGAC AGCCAAAACT GGTGGCGGAG GTCTTCGAGG AGATGAAGCA GGATCCGTGG ATGCGAGTCG ATGTAATCGC CTGGAACGTT CTGATCGACG GGTATTGTAG GGCTGGGATG ATGGATGAGG CCAAAGATAA CTTCACTGAG ATGAAGGAGC AAGGGTTCCA TCCTACTGTG GCAACTTATG GGAGTCTGGT GAAGGGGTAC GCATCAGCCG GTCAGGCTGG TGAAGCTTTA GTCATATGGA AAGAGATTCA AGAAAGAGTA TTGGCCAAGA AAGGGGATGA AGTTCAGCCA CTTGAGCCAG ATGGAGGGCT CTTTGACTGT CTAGTGGACA CATGTGTTAG AGCGGGGTAT TTTCAAAGAG CTCTGGAAGT GGTTGCTTGC ATGGAGCAGC AAGGCATTTT AGCTGATAAG GTCAAGTACA AACGCATGTT CATTGAGCTG TATTCTAACT TGTACACGAG CCAACATGCA TCAGCTAAGA GGCGAGCAAA ATCTGCAGAC AAGCGGAAAG CCGTCGATGC ATTTAAATTT TGGCTGGGAC TCCCAAATCA GTACTACCAA ACTGATTGGA CGCCATAA |
Protein |
>Mapoly0019s0086.1 MQSQCFVLLE PNCIRTVERT RSTSQAGDCG VSFVSETCLS AGSTRYGSFK HSKFHLSDSW MQHPLLCSSN LTPTSQSLRW NPMGLCVGSS SLLACSSSIA FRDHSLLVLG ASASLQLTLF CLRTENSYPS PAPPRRQSLR LVQQPREQSS FPPEALAKST IITSGDEDYD SIEERLLRAL KERRTEDAWQ LHQVLRRGGI LPSQTCCSRL IAQLSHKGTP SSLSRAQKML VDLQSVNKVS LLDADAMGLL VMASARAGAA RYALSITRVM LQMGFLPPVK VWSAVVSRLG KHPYDATLAL ELFDEICDLT ALEVESGNES SEGNSDLDVV SSNFVNGRRI VTQDPVGIRP DTGAFNAVLN ACATGALAKK AEEYVERMAE FGVRPDVLTF NILIKLFAKT GEANQLLNIL EQMEEHSIEP DISTLNSLVS AYTALGHLDE AERLVHSMQQ AAGQTRNSNN SGDCASQLEE HRVVGKVSPW VERITRGYEG AEEVEKTGKG SRSLQARWKN IVKPDVRTYT TLMNGYVKKG RMKDAVQLLI AMRNEEDARS HPNEVTYTTV IGACVSLGLM DEARSVLLEM AVQKVPANLV TYNTLLKGYC RAGQLSKAYE LMKDMKVAGL SPDVVSYNTL INGCIRRDDN VDALEVFREM RSAGIAPSEV SYTTLMNAFA RNGQPKLVAE VFEEMKQDPW MRVDVIAWNV LIDGYCRAGM MDEAKDNFTE MKEQGFHPTV ATYGSLVKGY ASAGQAGEAL VIWKEIQERV LAKKGDEVQP LEPDGGLFDC LVDTCVRAGY FQRALEVVAC MEQQGILADK VKYKRMFIEL YSNLYTSQHA SAKRRAKSAD KRKAVDAFKF WLGLPNQYYQ TDWTP |