Mp1g16790



Description

Annotation

Database ID Description
KOG KOG4282 Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; C-term missing; [K]
KOG KOG4282 Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50090 Myb-like domain profile.
PANTHER PTHR47211 TRIHELIX TRANSCRIPTION FACTOR ASR3
PANTHER PTHR47211:SF2 TRIHELIX TRANSCRIPTION FACTOR ASR3
SMART SM00717 sant
Coils Coil Coil
Pfam PF13837 Myb/SANT-like DNA-binding domain
MapolyID Mapoly0001s0020 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTRIHELIX1 transcription factor, Trihelix Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g16790.1 chr1:17045238..17057107 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g16790.2 chr1:17045238..17057107 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g16790.3 chr1:17045238..17056072 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g16790.4 chr1:17045238..17056072 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g16790.5 chr1:17045238..17055909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g16790.6 chr1:17046331..17056053 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.