Mp1g19210



Description

Annotation

Database ID Description
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
SMART SM00353 finulus
CDD cd11393 bHLH_AtbHLH_like
Gene3D G3DSA:4.10.280.10 HLH
PANTHER PTHR16223 TRANSCRIPTION FACTOR BHLH83-RELATED
PANTHER PTHR16223:SF125 TRANSCRIPTION FACTOR BHLH FAMILY-RELATED
Coils Coil Coil
Pfam PF00010 Helix-loop-helix DNA-binding domain
MapolyID Mapoly0001s0259 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH27 transcription factor, bHLH Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19210.1 chr1:19638938..19644168 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.2 chr1:19639525..19644173 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.3 chr1:19639712..19644151 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g19210.4 chr1:19639711..19644147 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.