Mp3g17350



Description

Annotation

Database ID Description
KEGG K12126 phytochrome-interacting factor 3
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11445 bHLH_AtPIF_like
SMART SM00353 finulus
Gene3D G3DSA:4.10.280.10 HLH
Pfam PF00010 Helix-loop-helix DNA-binding domain
Coils Coil Coil
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
PANTHER PTHR46807:SF1 TRANSCRIPTION FACTOR PIF3
PANTHER PTHR46807 TRANSCRIPTION FACTOR PIF3
MapolyID Mapoly0039s0059 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH6 transcription factor, bHLH Published
MpPIF phytochrome interacting bHLH transcription factor, PIF Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g17350.1 chr3:17482807..17488405 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g17350.2 chr3:17482807..17488404 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.