Database | ID | Description |
---|---|---|
KOG | KOG1836 | Extracellular matrix glycoprotein Laminin subunits alpha and gamma; N-term missing; [W] |
PANTHER | PTHR33124:SF5 | TRANSCRIPTION FACTOR IBH1-LIKE 1 |
SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain |
CDD | cd11444 | bHLH_AtIBH1_like |
ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. |
MobiDBLite | mobidb-lite | consensus disorder prediction |
PANTHER | PTHR33124 | TRANSCRIPTION FACTOR IBH1-LIKE 1 |
MapolyID | Mapoly0073s0059 | - |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpBHLH39 | transcription factor, bHLH | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mp5g18820.1 GGAGTCTAGT GGCTCTTGGA AGCACCTTCC TCTCGTGCCC GGCGATTCAT GTTGCTTCAA AGGGCTTGAA GTCAGGCTTC CAGTTCAAAG TCAGTTGCTG ACAAGCTCCT CCTCCACCTC CGCTCTCCTC TCTCTCTCCC AGTCTCCCCC CTCCTCCTCC CCCAGCCCCC GTCTGCGTGC CTCCTGCTCA TGCTCCAGAG CGTGCCAAGC GAAAAGGGTT ATAGTGAGCC AGAGGCCCTC CCAGAGGTTA GTAGCCCGCT ATTACTCAGT CGCTCTAAGC ACCCTGAGCC CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCCCCCT CTACGGGTAT ACCTGTTGCT CCATAAGCCC AGTCGCTCAC AACAAACACT CGCCCACTTC GTAGCCCTCA CTGCCTCCCG CACTCCCTCG CTCGAGAGCA CACACACTCT CTCGCCTCAC GCATACGACC ACTGACAGGA TTGGGCGTCT GCTACCCCCT TGTGCAATTT ATCCGATCCG TCTCCCTCGA GGGAGAAGCC GATTCGGTGC TGCCGTGGAA GCGCTGCCTG AGAGGAGCGC GACGACGAAA TTGACGCGGG GGCTTATCGT GCGATAGTCT TAATTCGAGA GTGATCGGAA GGAAACGAGG CCAAGGCAAC GAGAGCTTGT AGAGTTTTGG TTGCGAGAGT TTCTCGAGAG CCGAGTAGGT CGGTTGAGAA GAGCTCGGTC GTAGCAGGCA GGCGTAAGGC TTGGAGAGAT TTTTGAGCGC CGAATTGCGC GGACTTTGCC ACAATGGATC ACGTTCTTTG TGACAGTAGT GGAATTACGC TGCAAACGTC CATCCACGAC GGCTCGGATT ACTCTGCGTC ATTTCTGAAG TCGTTCCTCC CTGCCTACAA CATCGTCAAC CTGTCGGCCG ATCTGTCCAC GGTCTCGGAT CGTTTCAAAG CAATTCAATT CGCGGCCGAT GCGTCGCTGG CCATCAGCGG CAGCGGAGCC TCGTGGAGCG ACGCCCTGAG CCAGAAGCTG GCCGCCACCT CCTCCTCGTC CATCCAGGCC GTGCAACCCG CCTGCGAGGA GAGGCAATCG CGAGGCTCCG AGCCCTGCGC GAGCCCGGCC GAATCGACCT CGTCCAATCA CCACACTGGC GAGTGCGGCT GCCCGCCCGA GAGGACGGAG AGCGCCAGCA GCAGGTTGAT GCGCAGTTAC GGGAACTTAT TCGTGCAGAG GAAAAGATTA GCGGGTAGAA GGAACTTGGC CGGGCGCACG CTGCGCAAGG GAGACAGGGA AAATTGCTTC AGAAATCACG AATGCTATCT GGAAGCGAGC AGGCAGGCGA TTCTCAAGAA GCTGGCGCTG AGGAACAAGA GCAAGAGGCG CCTGCTGAGA TGCGCCTGGA AGCCCAAGCC CGTGCTGCGC AAGGTGAAAT CGCTGGCGCG GCCCCGCAGC AGGCCCTCGC GATCGCTCAA GGTCGCCGAG AGCGTCGAAC AGGATCAGGA CCTCGAGAGC CGATTCGTGG CCTTGCAAAG ACTCGTGCCC GGCGGCTCCA ACATGGACAC CTCGTCGCTG CTGGATGAGA CGGCCGATTT CGTCATGTTC CTGCAGATGC AGGTGCAATC CATGCAGGCG CTCGCCAGCG CCCTCGACGC GCAGCAAGCC CGCATGCCCG AGTTCTCGGC CTCGTAAGCG TGTACATCCC CTTCCATTCG CGACTCCTTC TCCACATTCT GACGCCACGC TCGCGAGCGC GAGAGCTGAA CGTGGAATTC GCCGGTCCGC CATGGTGCAC CTCTGCTGCC GTCCCGCATG CAACACACCT GCGGCTCTCG GCGCCGTCCA CTCGCGGGGG AGATCATCTC ACTCTTATTC TTTTCGCCCC GGCTCTCGGC TTACGGCTGC TCCTGCGCCG GCCGCCCTCT GTTCCTGGTC GCTGCGCCAA CGATACGTCA CGGTTTTGAA TACCATGGAG CCAATTCTGG GAGCTCCTCT CCCAGCGCGA GTTCGGCTCC AATAATTCCT AGCCGAAAGC AAATCTTCAT CACACAAGTT TTTGTAGGTC GAGGAGAATG AATCTCCTTC AAAGTCTAGC TAGGCTCTTG CGAGTATATG ATGACCTTGA TTCAGTAATG TACCACTCTG TATTATAACA CACCTTGTGA AAATTCACCT CTTTCTTACC |
mRNA UTR + CDS |
>Mp5g18820.1 GGAGTCTAGT GGCTCTTGGA AGCACCTTCC TCTCGTGCCC GGCGATTCAT GTTGCTTCAA AGGGCTTGAA GTCAGGCTTC CAGTTCAAAG TCAGTTGCTG ACAAGCTCCT CCTCCACCTC CGCTCTCCTC TCTCTCTCCC AGTCTCCCCC CTCCTCCTCC CCCAGCCCCC GTCTGCGTGC CTCCTGCTCA TGCTCCAGAG CGTGCCAAGC GAAAAGGGTT ATAGTGAGCC AGAGGCCCTC CCAGAGGTTA GTAGCCCGCT ATTACTCAGT CGCTCTAAGC ACCCTGAGCC CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCCCCCT CTACGGGTAT ACCTGTTGCT CCATAAGCCC AGTCGCTCAC AACAAACACT CGCCCACTTC GTAGCCCTCA CTGCCTCCCG CACTCCCTCG CTCGAGAGCA CACACACTCT CTCGCCTCAC GCATACGACC ACTGACAGGA TTGGGCGTCT GCTACCCCCT TGTGCAATTT ATCCGATCCG TCTCCCTCGA GGGAGAAGCC GATTCGGTGC TGCCGTGGAA GCGCTGCCTG AGAGGAGCGC GACGACGAAA TTGACGCGGG GGCTTATCGT GCGATAGTCT TAATTCGAGA GTGATCGGAA GGAAACGAGG CCAAGGCAAC GAGAGCTTGT AGAGTTTTGG TTGCGAGAGT TTCTCGAGAG CCGAGTAGGT CGGTTGAGAA GAGCTCGGTC GTAGCAGGCA GGCGTAAGGC TTGGAGAGAT TTTTGAGCGC CGAATTGCGC GGACTTTGCC ACAATGGATC ACGTTCTTTG TGACAGTAGT GGAATTACGC TGCAAACGTC CATCCACGAC GGCTCGGATT ACTCTGCGTC ATTTCTGAAG TCGTTCCTCC CTGCCTACAA CATCGTCAAC CTGTCGGCCG ATCTGTCCAC GGTCTCGGAT CGTTTCAAAG CAATTCAATT CGCGGCCGAT GCGTCGCTGG CCATCAGCGG CAGCGGAGCC TCGTGGAGCG ACGCCCTGAG CCAGAAGCTG GCCGCCACCT CCTCCTCGTC CATCCAGGCC GTGCAACCCG CCTGCGAGGA GAGGCAATCG CGAGGCTCCG AGCCCTGCGC GAGCCCGGCC GAATCGACCT CGTCCAATCA CCACACTGGC GAGTGCGGCT GCCCGCCCGA GAGGACGGAG AGCGCCAGCA GCAGGTTGAT GCGCAGTTAC GGGAACTTAT TCGTGCAGAG GAAAAGATTA GCGGGTAGAA GGAACTTGGC CGGGCGCACG CTGCGCAAGG GAGACAGGGA AAATTGCTTC AGAAATCACG AATGCTATCT GGAAGCGAGC AGGCAGGCGA TTCTCAAGAA GCTGGCGCTG AGGAACAAGA GCAAGAGGCG CCTGCTGAGA TGCGCCTGGA AGCCCAAGCC CGTGCTGCGC AAGGTGAAAT CGCTGGCGCG GCCCCGCAGC AGGCCCTCGC GATCGCTCAA GGTCGCCGAG AGCGTCGAAC AGGATCAGGA CCTCGAGAGC CGATTCGTGG CCTTGCAAAG ACTCGTGCCC GGCGGCTCCA ACATGGACAC CTCGTCGCTG CTGGATGAGA CGGCCGATTT CGTCATGTTC CTGCAGATGC AGGTGCAATC CATGCAGGCG CTCGCCAGCG CCCTCGACGC GCAGCAAGCC CGCATGCCCG AGTTCTCGGC CTCGTAAGCG TGTACATCCC CTTCCATTCG CGACTCCTTC TCCACATTCT GACGCCACGC TCGCGAGCGC GAGAGCTGAA CGTGGAATTC GCCGGTCCGC CATGGTGCAC CTCTGCTGCC GTCCCGCATG CAACACACCT GCGGCTCTCG GCGCCGTCCA CTCGCGGGGG AGATCATCTC ACTCTTATTC TTTTCGCCCC GGCTCTCGGC TTACGGCTGC TCCTGCGCCG GCCGCCCTCT GTTCCTGGTC GCTGCGCCAA CGATACGTCA CGGTTTTGAA TACCATGGAG CCAATTCTGG GAGCTCCTCT CCCAGCGCGA GTTCGGCTCC AATAATTCCT AGCCGAAAGC AAATCTTCAT CACACAAGTT TTTGTAGGTC GAGGAGAATG AATCTCCTTC AAAGTCTAGC TAGGCTCTTG CGAGTATATG ATGACCTTGA TTCAGTAATG TACCACTCTG TATTATAACA CACCTTGTGA AAATTCACCT CTTTCTTACC |
CDS |
>Mp5g18820.1 ATGGATCACG TTCTTTGTGA CAGTAGTGGA ATTACGCTGC AAACGTCCAT CCACGACGGC TCGGATTACT CTGCGTCATT TCTGAAGTCG TTCCTCCCTG CCTACAACAT CGTCAACCTG TCGGCCGATC TGTCCACGGT CTCGGATCGT TTCAAAGCAA TTCAATTCGC GGCCGATGCG TCGCTGGCCA TCAGCGGCAG CGGAGCCTCG TGGAGCGACG CCCTGAGCCA GAAGCTGGCC GCCACCTCCT CCTCGTCCAT CCAGGCCGTG CAACCCGCCT GCGAGGAGAG GCAATCGCGA GGCTCCGAGC CCTGCGCGAG CCCGGCCGAA TCGACCTCGT CCAATCACCA CACTGGCGAG TGCGGCTGCC CGCCCGAGAG GACGGAGAGC GCCAGCAGCA GGTTGATGCG CAGTTACGGG AACTTATTCG TGCAGAGGAA AAGATTAGCG GGTAGAAGGA ACTTGGCCGG GCGCACGCTG CGCAAGGGAG ACAGGGAAAA TTGCTTCAGA AATCACGAAT GCTATCTGGA AGCGAGCAGG CAGGCGATTC TCAAGAAGCT GGCGCTGAGG AACAAGAGCA AGAGGCGCCT GCTGAGATGC GCCTGGAAGC CCAAGCCCGT GCTGCGCAAG GTGAAATCGC TGGCGCGGCC CCGCAGCAGG CCCTCGCGAT CGCTCAAGGT CGCCGAGAGC GTCGAACAGG ATCAGGACCT CGAGAGCCGA TTCGTGGCCT TGCAAAGACT CGTGCCCGGC GGCTCCAACA TGGACACCTC GTCGCTGCTG GATGAGACGG CCGATTTCGT CATGTTCCTG CAGATGCAGG TGCAATCCAT GCAGGCGCTC GCCAGCGCCC TCGACGCGCA GCAAGCCCGC ATGCCCGAGT TCTCGGCCTC GTAA |
Protein |
>Mp5g18820.1 MDHVLCDSSG ITLQTSIHDG SDYSASFLKS FLPAYNIVNL SADLSTVSDR FKAIQFAADA SLAISGSGAS WSDALSQKLA ATSSSSIQAV QPACEERQSR GSEPCASPAE STSSNHHTGE CGCPPERTES ASSRLMRSYG NLFVQRKRLA GRRNLAGRTL RKGDRENCFR NHECYLEASR QAILKKLALR NKSKRRLLRC AWKPKPVLRK VKSLARPRSR PSRSLKVAES VEQDQDLESR FVALQRLVPG GSNMDTSSLL DETADFVMFL QMQVQSMQAL ASALDAQQAR MPEFSAS |