Mp7g07410



Description

Annotation

Database ID Description
KEGG K08511 vesicle-associated membrane protein 72
KOG KOG0859 Synaptobrevin/VAMP-like protein; [U]
ProSiteProfiles PS50892 v-SNARE coiled-coil homology domain profile.
Gene3D G3DSA:3.30.450.50 -
CDD cd15843 R-SNARE
ProSitePatterns PS00417 Synaptobrevin signature.
Pfam PF13774 Regulated-SNARE-like domain
ProSiteProfiles PS50859 Longin domain profile.
PRINTS PR00219 Synaptobrevin signature
Gene3D G3DSA:1.20.5.110 -
SMART SM01270 Longin_2
PANTHER PTHR21136 SNARE PROTEINS
CDD cd14824 Longin
PANTHER PTHR21136:SF203 SYNAPTOBREVIN, LONGIN-LIKE DOMAIN PROTEIN-RELATED
Coils Coil Coil
Pfam PF00957 Synaptobrevin
SUPERFAMILY SSF64356 SNARE-like
SUPERFAMILY SSF58038 SNARE fusion complex
MapolyID Mapoly0076s0053 -

Nomenclature

Gene symbol Product Transcript ID Status
MpVAMP72A.1 Ortholog of Arabidopsis VAMP72 genes Published
MpVAMP72A.1 Ortholog of Arabidopsis VAMP72 genes Published
MpVAMP72A.2 Ortholog of Arabidopsis VAMP72 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g07410.1 chr7:8600279..8603376 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g07410.2 chr7:8599710..8603376 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g07410.3 chr7:8600809..8603376 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.