Database | ID | Description |
---|---|---|
KOG | KOG0527 | HMG-box transcription factor; N-term missing; C-term missing; [K] |
MobiDBLite | mobidb-lite | consensus disorder prediction |
Gene3D | G3DSA:1.10.30.10 | DNA Binding (I) |
Pfam | PF00505 | HMG (high mobility group) box |
SMART | SM00398 | hmgende2 |
PANTHER | PTHR34682 | AT HOOK MOTIF-CONTAINING PROTEIN |
SUPERFAMILY | SSF47095 | HMG-box |
ProSiteProfiles | PS50118 | HMG boxes A and B DNA-binding domains profile. |
CDD | cd00084 | HMG-box |
MapolyID | Mapoly0051s0025 | - |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpHMGBOX5 | transcription factor, HMG-box | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mp7g16870.1 GACGTCGACT GGGCTGGCTG GGTGGCTGGG TGGCTGCGTG CCTAGCGCAG GCGAGCGTCG GGGCTCCAGC ATAGCGTCTC TTGACTTGGG CAGAGCAGCG GGCTGATTTC GAGCAGAGTC GATGGTTTGG TCGACGGCGC TCGACGACGA CGCGAGAATC GCTTCTCATG ACGGGCAGAG AGAGAGAGAG AGAGCACGCG GGGGAAGCGA GCGAGCCTGT GGGTGAGGAG GAGCAGGAGA ATGGCAGCGT GAGCACGCGC GGGTGATAGC TGCGGGGTGA AATTGCGGAC TCGGTGCTTG CTGGAGGGCT GGTTGGTTGG CTGGCTGGCT GGCTGGCTAG CTTTCTGACG CGAAGCTGGC CAGAGACGCC GAGACTCACC GCCTGATGAA CTTGTGCGAG GCGGACTAGT TCCTTGACCG GCAGTCAGAT TATGGTGGAC GACGAAATTC AACGCTTTGC TGCAAATATG AGCCTTCTTG ACCTGCGACA GAACCGAACT CTGTAGTTTC TTCGCAGGTG TGTTCTCCCA TCGATTACGC GATTGGCGCA GGCATTGACT TTTTTTCCCG TCGCTTTTAA CTTGTTGTAA TCGTTGCATC GACCTTTCTA TTGTCTCGGG GCATTGTCAC TGTCCCTTTT TCTGTCTTCC TGAGAGCGAG GCTGAACAAT CAGTTTTTTT GGACCGTGTT GTACTCTGCT CTGTTGTTGG AGTGTGGACT TCATGTGTTA TTGCCGCGGA GAGCAAATCG GAACGAAGGA AGCGAGATTT TTGTTCTGTC ATCATCAGAA GTCAAGATAT CAGTTTCCAT GGTGAATGAA CATGCTGATA GCTCGGGTCT AATGTGGAGT AGTCATCTGC TTCCAACATC TGCCATGCAC TGAGAATACC CGAGCTCAGT TTTCATATCT GATTTCTGGA CGTCTAAAGA GGGAATACTG CAAACTGTGA TGTCAATCTG TAGCAAAATC TAATGCAAAA TAGAGCGTTC TTTCTCTCTG CTTGTTGAAG GCACGTCCAT ACACGATTAC TGTTAGTGGT CAATATGGCG ATGAGCAGAA TGTTAGCATT GTTTGCTCGG CTGCAGGATT AGAACAGCAA ATTGATTTTT GTCGGAATAA TTTCTGATAC GGATTAGAAT GCTGCTTCTC CTTTTAGTCG GAACGTCTGT TAAGGATGAG TGAGTGGCAC ACTGTCAAGA TTTCTCAAGA CTGTGTGCAT GCGTTTTGGG ACCTTCTAGC TTGTTCAGAT GTCTAATCTG TATGTATGAT AGCCGACTAA AATGCGATCT AATCCTACAT AGAGGAGCTT CCTGATAATC TCAATGAACA AGTTTGAAGC CGCAGTCAGC CACATTACAT ACGAGGAGCA AAATCTGAGC AGGCAATAGC TTATCATCGG AGAAAATCAA TAAAAAAATA AAATTCGATT TTCAGAAATC TCAGAACTCT GGATGTGAGA TAGTTTGTTG TCGATTGATT GAGTTTTTGT CATCTCCTGC ATGACATCTG AATACCAACT TTCATTATCG AAGAAAGGAT GGAGACAGTT TGTGTGTGAC CGAGACACCT ATGGTTTGGA GGCAAGGGTG CTAATGGATA TGATCTTGTT CGATATCTTT GACCTGCAGT GGACAGGCTA TAGTCATGGA AGAACAGGCA GCCACTATAA TCATCTCGGA CGTCCCGGAA GAGAAAAAGG TGCCTGCAGA GAAAGAGGGA AGTGTCGGAA AATTAGTCAA GCTCAGGGCC TTCAATCTCT TCGCCTCTAA GATCCGGGAC ACAATCAAGG ATGAAAATCC AGTCGCCAAC GGCCATGAAA TCAAGCGCAT TGTTGGTCAG AAGTGGGCCA AGTTAGGCAA CCAGGACAAA CAGGAGTATA TTGACGTGGC TCAGAATGAA ACCGATCTGC TGGGCCAGAT GCCGGTGGAT CCCAATGCAC CCAAGCGGAG GCGACGAAGG CGAACCAAAG CTGAAATTGA ACTCGATGAC GGTTCTGGTT TTCCGAAGAA AAGAAGGGGG AGACCACGGA AAAACGGTGA TGCAATGAGA GGAGAGGTCA GCAATGGGAC TGTGCCATCA AATGGAGATG GACAACCCAA ACGAAGGAGA ATGCGTAAGC AGGGGGACGC ATCAGGCAAA GCTGTAGATC CAGCCTTTGT TGGCAAATGT GTAAGTGGGA CAGTGGATGG CTCTTTTGAT GCAGGGTATC TGGTCACTGT AAGGGTGGGA GACACTGATA TGGTCTTCCG TGGGGTACTT TTTGAACCAT CAATTGCCAT GCCTCCTAAC AACACCAACG ATGTGGCCCC AAATGTAAAA TTAGTTAGAA GGAACGACGG CATTGTCTTC CCTTCTACAG GTCCCATGCA TAGCAGTTCA GGGCCTGCTT CTTCATCGAA GCAGATGCTT GGGGGTCCTA TGCATTCAGC CGGGACCGTC GTCTAACTGA ATGGTTCTTT CTCGAACGCT TGTATGTGGT ACAATCATGA TGTTTAGGAT CCCTTTACTT TACAGCCCAG GCATTGGCTA ACTGCTGATC TAGCTGTCAC TCGACCTCGG TTCGACCCCA AGTTCATGCT GGATGGAGTT CGGCCCCCAC CAATGCAGGA AGAGTCCGGT ATGTTGTAAA TTAGAAAGGA CTTCCTTTCA AAAACTCGCT CACTTGTCCA TAAAATTGCT TGTAACTTCG ATCGCGTAGT AAAGGAAACG CCCAAACAGT TTTTTTGCTA ATAAATAGGT TCGATCC |
mRNA UTR + CDS |
>Mp7g16870.1 GACGTCGACT GGGCTGGCTG GGTGGCTGGG TGGCTGCGTG CCTAGCGCAG GCGAGCGTCG GGGCTCCAGC ATAGCGTCTC TTGACTTGGG CAGAGCAGCG GGCTGATTTC GAGCAGAGTC GATGGTTTGG TCGACGGCGC TCGACGACGA CGCGAGAATC GCTTCTCATG ACGGGCAGAG AGAGAGAGAG AGAGCACGCG GGGGAAGCGA GCGAGCCTGT GGGTGAGGAG GAGCAGGAGA ATGGCAGCGT GAGCACGCGC GGGTGATAGC TGCGGGGTGA AATTGCGGAC TCGGTGCTTG CTGGAGGGCT GGTTGGTTGG CTGGCTGGCT GGCTGGCTAG CTTTCTGACG CGAAGCTGGC CAGAGACGCC GAGACTCACC GCCTGATGAA CTTGTGCGAG GCGGACTAGT TCCTTGACCG GCAGTCAGAT TATGGTGGAC GACGAAATTC AACGCTTTGC TGCAAATATG AGCCTTCTTG ACCTGCGACA GAACCGAACT CTGTAGTTTC TTCGCAGTGG ACAGGCTATA GTCATGGAAG AACAGGCAGC CACTATAATC ATCTCGGACG TCCCGGAAGA GAAAAAGGTG CCTGCAGAGA AAGAGGGAAG TGTCGGAAAA TTAGTCAAGC TCAGGGCCTT CAATCTCTTC GCCTCTAAGA TCCGGGACAC AATCAAGGAT GAAAATCCAG TCGCCAACGG CCATGAAATC AAGCGCATTG TTGGTCAGAA GTGGGCCAAG TTAGGCAACC AGGACAAACA GGAGTATATT GACGTGGCTC AGAATGAAAC CGATCTGCTG GGCCAGATGC CGGTGGATCC CAATGCACCC AAGCGGAGGC GACGAAGGCG AACCAAAGCT GAAATTGAAC TCGATGACGG TTCTGGTTTT CCGAAGAAAA GAAGGGGGAG ACCACGGAAA AACGGTGATG CAATGAGAGG AGAGGTCAGC AATGGGACTG TGCCATCAAA TGGAGATGGA CAACCCAAAC GAAGGAGAAT GCGTAAGCAG GGGGACGCAT CAGGCAAAGC TGTAGATCCA GCCTTTGTTG GCAAATGTGT AAGTGGGACA GTGGATGGCT CTTTTGATGC AGGGTATCTG GTCACTGTAA GGGTGGGAGA CACTGATATG GTCTTCCGTG GGGTACTTTT TGAACCATCA ATTGCCATGC CTCCTAACAA CACCAACGAT GTGGCCCCAA ATGTAAAATT AGTTAGAAGG AACGACGGCA TTGTCTTCCC TTCTACAGGT CCCATGCATA GCAGTTCAGG GCCTGCTTCT TCATCGAAGC AGATGCTTGG GGGTCCTATG CATTCAGCCG GGACCGTCGT CTAACTGAAT GGTTCTTTCT CGAACGCTTG TATGTGGTAC AATCATGATG TTTAGGATCC CTTTACTTTA CAGCCCAGGC ATTGGCTAAC TGCTGATCTA GCTGTCACTC GACCTCGGTT CGACCCCAAG TTCATGCTGG ATGGAGTTCG GCCCCCACCA ATGCAGGAAG AGTCCGGTAT GTTGTAAATT AGAAAGGACT TCCTTTCAAA AACTCGCTCA CTTGTCCATA AAATTGCTTG TAACTTCGAT CGCGTAGTAA AGGAAACGCC CAAACAGTTT TTTTGCTAAT AAATAGGTTC GATCC |
CDS |
>Mp7g16870.1 ATGGAAGAAC AGGCAGCCAC TATAATCATC TCGGACGTCC CGGAAGAGAA AAAGGTGCCT GCAGAGAAAG AGGGAAGTGT CGGAAAATTA GTCAAGCTCA GGGCCTTCAA TCTCTTCGCC TCTAAGATCC GGGACACAAT CAAGGATGAA AATCCAGTCG CCAACGGCCA TGAAATCAAG CGCATTGTTG GTCAGAAGTG GGCCAAGTTA GGCAACCAGG ACAAACAGGA GTATATTGAC GTGGCTCAGA ATGAAACCGA TCTGCTGGGC CAGATGCCGG TGGATCCCAA TGCACCCAAG CGGAGGCGAC GAAGGCGAAC CAAAGCTGAA ATTGAACTCG ATGACGGTTC TGGTTTTCCG AAGAAAAGAA GGGGGAGACC ACGGAAAAAC GGTGATGCAA TGAGAGGAGA GGTCAGCAAT GGGACTGTGC CATCAAATGG AGATGGACAA CCCAAACGAA GGAGAATGCG TAAGCAGGGG GACGCATCAG GCAAAGCTGT AGATCCAGCC TTTGTTGGCA AATGTGTAAG TGGGACAGTG GATGGCTCTT TTGATGCAGG GTATCTGGTC ACTGTAAGGG TGGGAGACAC TGATATGGTC TTCCGTGGGG TACTTTTTGA ACCATCAATT GCCATGCCTC CTAACAACAC CAACGATGTG GCCCCAAATG TAAAATTAGT TAGAAGGAAC GACGGCATTG TCTTCCCTTC TACAGGTCCC ATGCATAGCA GTTCAGGGCC TGCTTCTTCA TCGAAGCAGA TGCTTGGGGG TCCTATGCAT TCAGCCGGGA CCGTCGTCTA A |
Protein |
>Mp7g16870.1 MEEQAATIII SDVPEEKKVP AEKEGSVGKL VKLRAFNLFA SKIRDTIKDE NPVANGHEIK RIVGQKWAKL GNQDKQEYID VAQNETDLLG QMPVDPNAPK RRRRRRTKAE IELDDGSGFP KKRRGRPRKN GDAMRGEVSN GTVPSNGDGQ PKRRRMRKQG DASGKAVDPA FVGKCVSGTV DGSFDAGYLV TVRVGDTDMV FRGVLFEPSI AMPPNNTNDV APNVKLVRRN DGIVFPSTGP MHSSSGPASS SKQMLGGPMH SAGTVV |