Database | ID | Description |
---|---|---|
KOG | KOG0526 | Nucleosome-binding factor SPN, POB3 subunit; N-term missing; [KLB] |
PRINTS | PR00886 | High mobility group (HMG1/HMG2) protein signature |
SUPERFAMILY | SSF47095 | - |
SMART | SM00398 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction |
Pfam | PF00505 | HMG (high mobility group) box |
ProSiteProfiles | PS50118 | HMG boxes A and B DNA-binding domains profile. |
CDD | cd01390 | HMGB-UBF_HMG-box |
Gene3D | G3DSA:1.10.30.10 | - |
MapolyID | Mapoly0031s0059 |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpHMGBOX4 | transcription factor, HMG-box | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mp2g04030.1 ACTCTCCGCC CCTCGCACGT CTCCGCCTCT CAGTTTCTCG AGTGCAGACA TGTCAACAAA TTCGAGCTCG AGCTAGTTTT ATAAAGAGAG CAAGACCCGG CGAGTCCAGC GAGTGCGGAG CGCTGTCTTT CTCGCTCTCG GACACATGAG CTTGTTGTAG ATTTTAAGTT GAATGCAAGA TTGTTTTGGG ATCCCGGGTC GAGCTGAATT ACTTGAGTGC TGAGCCTCAG GCTGCCCAAA CTATGGGGAG ACAAAGAGCG CCCGCCAAGC GACGAAAGAC GACGAGCAAC AAATCGACGA GGCCAAGAGG AGGAGGTAAT GGCCAGTCGA TGGATGTACG TCTCCTATAA CATAATAAAC CTATCGACGG ATTGACTCCT CGAGTTATCG GTAACTCGAA AAAGAATTTC TTATTGAAGG AAGCGACCGG CAATTGATTG CCCGAATCAT TTCAGATGTA AAGAACGAGC GCCATTCTTG TGGTTGAGGA GATATCAGAG TCGAGAAATG CGTATCGATC GGAACTCCGT TAGATTTTGT GAGCCGCTGG CTGCGACCAT CGATCGGAGG ACCTAGGGAA TAGTTTCGTA TAATCGAGTT TGATGAAGAA TCGGTTTTGT GCACGTCGAC CGCTTGTTTG TAGACGAGAT CGTGTCCTGA GTTGGGCGTC AAGTGAGGGT TTTGTCTCAT TAACATAATC ACATCGAGAC TCAAGACGTT GATTTACGAT GACATTTGTG GCCTTGTCAG CATTCTTCCG GCCTCCTGCG AAGAGCAAGA CGAAAATTCT GGCCGACATG CGCAGAGAAA AGAAGCGACC CAAGAAGGCG ATGGGAGCTT ACATGTATTT CTGTAAGCTG AACAGGAAGA AGGTGCAGAC GTCAAACCCG ACTATGACTT TCGGCGAAAT TGGCAGAGTT CTCGGAAGCC AGTGGTGCAC GCTGACCGAT AAGGAGAAGA AAGTGAGCCT CTGATTCTAA TCTTTCCCAG TCGATCTCAT CACCAGAGGT CTTTATGGAC CGGCTTGAGC ACTAGACTTC CTCCTCTCCT CTGCCTCACC TTCTCACTTC GGTCAAACGC TGCTGTTAAT CTGAACTCGC TCCAATGAGT TTACACAATT CGGAAGTCAG CAAACTGCGT TCTCATCGGC TTGTCTGCCA GAGAATATCG GGAGCAAAGT AATGTCTCGA AAGATGTTCG AGAACATCCT CGAATATGTC TGTCCAGATG GACATTTGTC TTCCACAGAA ACTGCTGCTT CCAGGGAATC TTGTCAAAGA TTACCTGGAA CGATGGCTCC TGCTCTTTTC ATCTTTTCTT CAGCTTACGG ACATCGATCG TACAACCTGT CGTACAGTGC CGTCGTCGGC ACGTGGCCAA GCTGACGTTG CTGCTGTACA GTCTGTCTGC GGTCAACACT GGATGTGGTA GGACTTGTAT CAATGACTCG TAGCTGTCCG GTCCTAGTCC GACCATTCAG GTGCGCGGAA TCTGACTCAT GGGTTCTTAT GCGAAGATTG GCCTGGCTCT GGCTCTTGGT GTGCAGAAAT ACATCAGAAA AGCTGAGACA GACAAGGTGC GCTACGCCAA GGAGATGAAG CGATTTGCTA AGTAGAGCGG GGAAAGTGCC ATCCTTTCGC CCAGGTGCGC CGAATTGAGA GGAGTTCCAG TACGTTTAGA AAGATCTAGC TGTCCCGCCC CTATCCACCG AACGAAGGTG GCAAATACCC TGGCCTGTAA TATCTGGAGG GGTGATAAAT TATGTGCTTC AGACCTCACT CGAATCCCGC TAATGCAGGA AGAAGTGCGA GGAGCACGAG CTGTCGAGGG TCCAAAGGGA GAGTGTTTGT GGCATAAGTC TCGCACATCT CTCATTTGTT CTTTTGTTAG TCAAGTCGAG ATCTTGACCT CGAGGAGACG TTAGCGTGCT CCTCGAGTTA TATATGATAC TAGAATGTCG ACAATACTGT CGAGGCGCTC TGAGATTCAG AGTTGTCTGA TGATAAGAAT GCTGGCCGAG GCGAAAATAA TGGTACACTA TTTTGATATA ATCATGTGAT ATGGAAAAGA TGCCCCAGTT TTGATGACAG GTAAGTTTAA TATTCACTAA TTATC |
mRNA UTR + CDS |
>Mp2g04030.1 ACTCTCCGCC CCTCGCACGT CTCCGCCTCT CAGTTTCTCG AGTGCAGACA TGTCAACAAA TTCGAGCTCG AGCTAGTTTT ATAAAGAGAG CAAGACCCGG CGAGTCCAGC GAGTGCGGAG CGCTGTCTTT CTCGCTCTCG GACACATGAG CTTGTTGTAG ATTTTAAGTT GAATGCAAGA TTGTTTTGGG ATCCCGGGTC GAGCTGAATT ACTTGAGTGC TGAGCCTCAG GCTGCCCAAA CTATGGGGAG ACAAAGAGCG CCCGCCAAGC GACGAAAGAC GACGAGCAAC AAATCGACGA GGCCAAGAGG AGGAGCATTC TTCCGGCCTC CTGCGAAGAG CAAGACGAAA ATTCTGGCCG ACATGCGCAG AGAAAAGAAG CGACCCAAGA AGGCGATGGG AGCTTACATG TATTTCTGTA AGCTGAACAG GAAGAAGGTG CAGACGTCAA ACCCGACTAT GACTTTCGGC GAAATTGGCA GAGTTCTCGG AAGCCAGTGG TGCACGCTGA CCGATAAGGA GAAGAAAAAA TACATCAGAA AAGCTGAGAC AGACAAGGTG CGCTACGCCA AGGAGATGAA GCGATTTGCT AAGTAGAGCG GGGAAAGTGC CATCCTTTCG CCCAGGTGCG CCGAATTGAG AGGAGTTCCA GTACGTTTAG AAAGATCTAG CTGTCCCGCC CCTATCCACC GAACGAAGGT GGCAAATACC CTGGCCTGTA ATATCTGGAG GGGTGATAAA TTATGTGCTT CAGACCTCAC TCGAATCCCG CTAATGCAGG AAGAAGTGCG AGGAGCACGA GCTGTCGAGG GTCCAAAGGG AGAGTGTTTG TGGCATAAGT CTCGCACATC TCTCATTTGT TCTTTTGTTA GTCAAGTCGA GATCTTGACC TCGAGGAGAC GTTAGCGTGC TCCTCGAGTT ATATATGATA CTAGAATGTC GACAATACTG TCGAGGCGCT CTGAGATTCA GAGTTGTCTG ATGATAAGAA TGCTGGCCGA GGCGAAAATA ATGGTACACT ATTTTGATAT AATCATGTGA TATGGAAAAG ATGCCCCAGT TTTGATGACA GGTAAGTTTA ATATTCACTA ATTATC |
CDS |
>Mp2g04030.1 ATGGGGAGAC AAAGAGCGCC CGCCAAGCGA CGAAAGACGA CGAGCAACAA ATCGACGAGG CCAAGAGGAG GAGCATTCTT CCGGCCTCCT GCGAAGAGCA AGACGAAAAT TCTGGCCGAC ATGCGCAGAG AAAAGAAGCG ACCCAAGAAG GCGATGGGAG CTTACATGTA TTTCTGTAAG CTGAACAGGA AGAAGGTGCA GACGTCAAAC CCGACTATGA CTTTCGGCGA AATTGGCAGA GTTCTCGGAA GCCAGTGGTG CACGCTGACC GATAAGGAGA AGAAAAAATA CATCAGAAAA GCTGAGACAG ACAAGGTGCG CTACGCCAAG GAGATGAAGC GATTTGCTAA GTAG |
Protein |
>Mp2g04030.1 MGRQRAPAKR RKTTSNKSTR PRGGAFFRPP AKSKTKILAD MRREKKRPKK AMGAYMYFCK LNRKKVQTSN PTMTFGEIGR VLGSQWCTLT DKEKKKYIRK AETDKVRYAK EMKRFAK |
Sequences: |
Gene UTR + CDS + intron |
>Mp2g04030.2 GACGGCGTGA TCCCGTCCAG AGCGACGGCG CAGAGTATTG GATCGAGATC TCTACCGGGA ATGTTCTGCA CCAGCTGCCG AACGGTGTAT CATTACGGTC TTCATCGTCG CAATACGTCG CAGCAGGCGC CGTCGTCGCG GCTGCTCTGC GGATCCTGTC GAATCGTGAT TTCTAGAGCT TTCATGAATT CTGCGTCCCT CGTGTGAGCC TTTCTCAATC TCTGCGCAAC TCTCCGCCCC TCGCACGTCT CCGCCTCTCA GTTTCTCGAG TGCAGACATG TCAACAAATT CGAGCTCGAG CTAGTTTTAT AAAGAGAGCA AGACCCGGCG AGTCCAGCGA GTGCGGAGCG CTGTCTTTCT CGCTCTCGGA CACATGAGCT TGTTGTAGAT TTTAAGTTGA ATGCAAGATT GTTTTGGGAT CCCGGGTCGA GCTGAATTAC TTGAGTGCTG AGCCTCAGGC TGCCCAAACT ATGGGGAGAC AAAGAGCGCC CGCCAAGCGA CGAAAGACGA CGAGCAACAA ATCGACGAGG CCAAGAGGAG GAGGTAATGG CCAGTCGATG GATGTACGTC TCCTATAACA TAATAAACCT ATCGACGGAT TGACTCCTCG AGTTATCGGT AACTCGAAAA AGAATTTCTT ATTGAAGGAA GCGACCGGCA ATTGATTGCC CGAATCATTT CAGATGTAAA GAACGAGCGC CATTCTTGTG GTTGAGGAGA TATCAGAGTC GAGAAATGCG TATCGATCGG AACTCCGTTA GATTTTGTGA GCCGCTGGCT GCGACCATCG ATCGGAGGAC CTAGGGAATA GTTTCGTATA ATCGAGTTTG ATGAAGAATC GGTTTTGTGC ACGTCGACCG CTTGTTTGTA GACGAGATCG TGTCCTGAGT TGGGCGTCAA GTGAGGGTTT TGTCTCATTA ACATAATCAC ATCGAGACTC AAGACGTTGA TTTACGATGA CATTTGTGGC CTTGTCAGCA TTCTTCCGGC CTCCTGCGAA GAGCAAGACG AAAATTCTGG CCGACATGCG CAGAGAAAAG AAGCGACCCA AGAAGGCGAT GGGAGCTTAC ATGTATTTCT GTAAGCTGAA CAGGAAGAAG GTGCAGACGT CAAACCCGAC TATGACTTTC GGCGAAATTG GCAGAGTTCT CGGAAGCCAG TGGTGCACGC TGACCGATAA GGAGAAGAAA GTGAGCCTCT GATTCTAATC TTTC |
mRNA UTR + CDS |
>Mp2g04030.2 GACGGCGTGA TCCCGTCCAG AGCGACGGCG CAGAGTATTG GATCGAGATC TCTACCGGGA ATGTTCTGCA CCAGCTGCCG AACGGTGTAT CATTACGGTC TTCATCGTCG CAATACGTCG CAGCAGGCGC CGTCGTCGCG GCTGCTCTGC GGATCCTGTC GAATCGTGAT TTCTAGAGCT TTCATGAATT CTGCGTCCCT CGTGTGAGCC TTTCTCAATC TCTGCGCAAC TCTCCGCCCC TCGCACGTCT CCGCCTCTCA GTTTCTCGAG TGCAGACATG TCAACAAATT CGAGCTCGAG CTAGTTTTAT AAAGAGAGCA AGACCCGGCG AGTCCAGCGA GTGCGGAGCG CTGTCTTTCT CGCTCTCGGA CACATGAGCT TGTTGTAGAT TTTAAGTTGA ATGCAAGATT GTTTTGGGAT CCCGGGTCGA GCTGAATTAC TTGAGTGCTG AGCCTCAGGC TGCCCAAACT ATGGGGAGAC AAAGAGCGCC CGCCAAGCGA CGAAAGACGA CGAGCAACAA ATCGACGAGG CCAAGAGGAG GAGCATTCTT CCGGCCTCCT GCGAAGAGCA AGACGAAAAT TCTGGCCGAC ATGCGCAGAG AAAAGAAGCG ACCCAAGAAG GCGATGGGAG CTTACATGTA TTTCTGTAAG CTGAACAGGA AGAAGGTGCA GACGTCAAAC CCGACTATGA CTTTCGGCGA AATTGGCAGA GTTCTCGGAA GCCAGTGGTG CACGCTGACC GATAAGGAGA AGAAAGTGAG CCTCTGATTC TAATCTTTC |
CDS |
>Mp2g04030.2 ATGGGGAGAC AAAGAGCGCC CGCCAAGCGA CGAAAGACGA CGAGCAACAA ATCGACGAGG CCAAGAGGAG GAGCATTCTT CCGGCCTCCT GCGAAGAGCA AGACGAAAAT TCTGGCCGAC ATGCGCAGAG AAAAGAAGCG ACCCAAGAAG GCGATGGGAG CTTACATGTA TTTCTGTAAG CTGAACAGGA AGAAGGTGCA GACGTCAAAC CCGACTATGA CTTTCGGCGA AATTGGCAGA GTTCTCGGAA GCCAGTGGTG CACGCTGACC GATAAGGAGA AGAAAGTGAG CCTCTGA |
Protein |
>Mp2g04030.2 MGRQRAPAKR RKTTSNKSTR PRGGAFFRPP AKSKTKILAD MRREKKRPKK AMGAYMYFCK LNRKKVQTSN PTMTFGEIGR VLGSQWCTLT DKEKKVSL |