Mp2g13330



Description

Annotation

Database ID Description
KEGG K14431 TGA; transcription factor TGA
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00170 bZIP transcription factor
ProSitePatterns PS00036 Basic-leucine zipper (bZIP) domain signature.
CDD cd14708 bZIP_HBP1b-like
Coils Coil -
ProSiteProfiles PS50217 Basic-leucine zipper (bZIP) domain profile.
SUPERFAMILY SSF57959 -
Gene3D G3DSA:1.20.5.170 -
Pfam PF14144 Seed dormancy control
ProSiteProfiles PS51806 DOG1 domain profile.
SMART SM00338 -
MapolyID Mapoly0026s0039.1
GO GO:0043565 sequence-specific DNA binding
GO GO:0006351 transcription, DNA-templated
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0003700 DNA-binding transcription factor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBZIP8 transcription factor, bZIP Public
MpTGA TGA transcription factor Public

Transcript models

Transcript ID Location Sequences Extract region
Mp2g13330.1 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.2 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.3 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.4 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.5 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.6 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.7 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13330.8 chr2:13653285..13660469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.