Mp2g16090



Description

Annotation

Database ID Description
KEGG K12121 PHYB; phytochrome B
CDD cd00075 HATPase_c
ProSiteProfiles PS50112 PAS repeat profile.
SMART SM00091 -
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein
Pfam PF01590 GAF domain
SUPERFAMILY SSF55785 -
Gene3D G3DSA:3.30.450.270 -
Gene3D G3DSA:3.30.565.10 -
SMART SM00065 -
ProSiteProfiles PS50113 PAC domain profile.
ProSiteProfiles PS50109 Histidine kinase domain profile.
Pfam PF08446 PAS fold
SUPERFAMILY SSF55874 -
Gene3D G3DSA:3.30.450.20 -
Pfam PF00512 His Kinase A (phospho-acceptor) domain
SUPERFAMILY SSF55781 -
Gene3D G3DSA:3.30.450.40 -
CDD cd00130 PAS
ProSiteProfiles PS50046 Phytochrome chromophore attachment site domain profile.
PRINTS PR01033 Phytochrome signature
SMART SM00388 -
CDD cd00082 HisKA
Pfam PF00989 PAS fold
Pfam PF00360 Phytochrome region
ProSitePatterns PS00245 Phytochrome chromophore attachment site signature.
MapolyID Mapoly0122s0054.1

Nomenclature

Gene symbol Product Transcript ID Status
MpPHY Red light/Far-red light receptor PHYTOCHROME Published

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16090.1 chr2:17188907..17194363 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.