Mp6g00050



Description

Annotation

Database ID Description
KEGG K08486 STX1B_2_3; syntaxin 1B/2/3
KOG KOG0810 SNARE protein Syntaxin 1 and related proteins; [U]
CDD cd00179 SynN
CDD cd15848 SNARE_syntaxin1-like
Coils Coil -
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
Pfam PF00804 Syntaxin
Pfam PF05739 SNARE domain
SMART SM00503 -
SMART SM00397 -
SUPERFAMILY SSF47661 -
Gene3D G3DSA:1.20.58.70 -
MapolyID Mapoly0163s0015.1
GO GO:0016192 vesicle-mediated transport
GO GO:0016020 membrane
GO GO:0005484 SNAP receptor activity
GO GO:0006886 intracellular protein transport

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP12A Common ortholog of both Arabidopsis SYP11 and SYP12 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp6g00050.1 chr6:93098..94998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.