Mp8g11800



Description

Annotation

Database ID Description
KOG KOG4224 Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting; C-term missing; [U]
SMART SM00185 -
Pfam PF00514 Armadillo/beta-catenin-like repeat
Pfam PF04564 U-box domain
Gene3D G3DSA:3.30.40.10 -
SMART SM00504 -
Gene3D G3DSA:1.25.10.10 -
SUPERFAMILY SSF57850 -
CDD cd16664 RING-Ubox_PUB
Coils Coil -
ProSiteProfiles PS51698 U-box domain profile.
SUPERFAMILY SSF48371 -
MapolyID Mapoly0008s0036.1

Nomenclature

Gene symbol Product Transcript ID Status
MpNOP1 Plant U-box E3 Ubiquitin Ligase NOP1 Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g11800.1 chr8:13311355..13318824 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g11800.2 chr8:13311355..13318824 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.