Mp1g03950



Description

Annotation

Database ID Description
KOG KOG1601 GATA-4/5/6 transcription factors; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
ProSitePatterns PS00344 GATA-type zinc finger domain.
PANTHER PTHR45658:SF46 GATA TRANSCRIPTION FACTOR 9
Pfam PF00320 GATA zinc finger
SMART SM00401 GATA_3
PIRSF PIRSF016992 Txn_fac_GATA_plant
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
CDD cd00202 ZnF_GATA
PANTHER PTHR45658 GATA TRANSCRIPTION FACTOR
Gene3D G3DSA:3.30.50.10 -
GO GO:0045893 positive regulation of transcription, DNA-templated
GO GO:0005634 nucleus
GO GO:0043565 sequence-specific DNA binding
GO GO:0003677 DNA binding
GO GO:0008270 zinc ion binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0005s0212 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA2 transcription factor, GATA Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03950.1 chr1:4229638..4234039 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.