Mp1g08030



Description

Annotation

Database ID Description
KEGG K08490 STX5; syntaxin 5
KOG KOG0812 SNARE protein SED5/Syntaxin 5; [U]
Pfam PF11416 Syntaxin-5 N-terminal, Sly1p-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00397 tSNARE_6
PANTHER PTHR19957 SYNTAXIN
CDD cd15844 SNARE_syntaxin5
Pfam PF05739 SNARE domain
Gene3D G3DSA:1.20.5.110 -
SUPERFAMILY SSF47661 t-snare proteins
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
PANTHER PTHR19957:SF293 SYNTAXIN-32-LIKE
GO GO:0016192 vesicle-mediated transport
GO GO:0016020 membrane
MapolyID Mapoly0036s0047 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP3 Ortholog of Arabidopsis SYP3 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08030.1 chr1:8386696..8392640 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08030.2 chr1:8386602..8392640 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.