Mp1g11660



Description

Annotation

Database ID Description
KOG KOG0492 Transcription factor MSH, contains HOX domain; [R]
Pfam PF00046 Homeodomain
ProSiteProfiles PS50071 'Homeobox' domain profile.
PANTHER PTHR46777:SF5 WUSCHEL-RELATED HOMEOBOX 13
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46777 WUSCHEL-RELATED HOMEOBOX 13
CDD cd00086 homeodomain
SMART SM00389 HOX_1
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding
MapolyID Mapoly0014s0060 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD6 transcription factor, HD, homeodomain protein Published
MpWOX transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11660.1 chr1:11923403..11930642 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11660.2 chr1:11923486..11930642 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.