Mp1g17220



Description

Annotation

Database ID Description
KEGG K08506 SYP7; syntaxin of plants SYP7
KOG KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex; N-term missing; [U]
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF05739 SNARE domain
PANTHER PTHR19957:SF264 SYNTAXIN-73
PANTHER PTHR19957 SYNTAXIN
CDD cd15841 SNARE_Qc
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SUPERFAMILY SSF58038 SNARE fusion complex
Coils Coil Coil
SMART SM00397 tSNARE_6
Gene3D G3DSA:1.20.5.110 -
MapolyID Mapoly0001s0062 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7B.1 Ortholog of Arabidopsis SYP7 genes Published
MpSYP7B.2 Ortholog of Arabidopsis SYP7 genes Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17220.1 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17220.2 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.