Mp2g02920



Description

Annotation

Database ID Description
KEGG K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
KOG KOG0055 Multidrug/pheromone exporter, ABC superfamily; [Q]
ProSitePatterns PS00211 ABC transporters family signature.
Pfam PF00005 ABC transporter
PANTHER PTHR24221:SF415 ABC TRANSPORTER B FAMILY MEMBER 13-RELATED
Gene3D G3DSA:1.20.1560.10 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00664 ABC transporter transmembrane region
SUPERFAMILY SSF90123 ABC transporter transmembrane region
CDD cd03249 ABC_MTABC3_MDL1_MDL2
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
PANTHER PTHR24221 ATP-BINDING CASSETTE SUB-FAMILY B
Gene3D G3DSA:3.40.50.300 -
CDD cd18578 ABC_6TM_Pgp_ABCB1_D2_like
CDD cd18577 ABC_6TM_Pgp_ABCB1_D1_like
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SMART SM00382 AAA_5
GO GO:0016021 integral component of membrane
GO GO:0005524 ATP binding
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
MapolyID Mapoly0075s0053 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCB1 Auxin transport Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g02920.1 chr2:3385035..3394443 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.