Mp2g04030



Description

Annotation

Database ID Description
KOG KOG0381 HMG box-containing protein; [R]
CDD cd01390 HMGB-UBF_HMG-box
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00505 HMG (high mobility group) box
ProSiteProfiles PS50118 HMG boxes A and B DNA-binding domains profile.
PRINTS PR00886 High mobility group (HMG1/HMG2) protein signature
Gene3D G3DSA:1.10.30.10 DNA Binding (I)
SMART SM00398 hmgende2
PANTHER PTHR48112:SF22 HIGH MOBILITY GROUP PROTEIN DSP1
SUPERFAMILY SSF47095 HMG-box
PANTHER PTHR48112 HIGH MOBILITY GROUP PROTEIN DSP1
MapolyID Mapoly0031s0059 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHMGBOX4 transcription factor, HMG-box Published

Transcript models

Transcript ID Location Sequences Extract region
Mp2g04030.1 chr2:4224799..4226913 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g04030.2 chr2:4225928..4227141 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.