| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF01535 | PPR repeat |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain |
| Gene3D | G3DSA:1.25.40.10 | - |
| Pfam | PF13041 | PPR repeat family |
| Pfam | PF12854 | PPR repeat |
| PANTHER | PTHR47937 | PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEIN |
| GO | GO:0005515 | protein binding |
| MapolyID | Mapoly0031s0117 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_24 | Pentatricopeptide repeat proteins | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g04620.1 acgtgagttt caaggcgctc cagaacctta gcattaatcg agatgagccg ccagtcccaa aatgcggtgc ttcaaaatca gaaagccgga tcgaaagaat tccgggcgag tgcgaagggc acgctcctcc caggcgccag gtcaccctct cggaatttac acgccggaag gcctgccacg tcatgctcat tgcagtaata cgggccccga atcacgccgt cctgcgaact gttgggataa agttactgcg ctcgagaatc cggcgagcgg ccacacagat cgcagatttg gtcggattcg gcccaaatct gcattggcat gtggcgccct cgctcccgcc tccgctctcc agcctccgcc tgcgcctctg cctcttctcc ttcgaggcct tcgatttccc cgcacccgca tgtcgattca ctgaccatca gaccgaccga tcgactgcaa ttggccgcgg gtcgctgctt cgtcggagaa tcgtcgaggc gtggagggga gggcagtgat gatcttgtca tgggctgggc agaatgtgcg gagtgtgtcc ggggcctgcc ctcggagtcc gtcgtggcag gagttggaga ttgtcgccaa ggctgtgagc cttcgtcatg atgatgatga tggtggtggt ggtggtgcac agaaattcag gcggcgcaat gtcgcgcctc cggcttgttc tcggtggtct ctgtctttgg atcaggtgcc ggcgtctgcg tcggtgcgaa gagcggccac ggagcatctc gagagcttgc aggtcgttgt cgaaggcacc cctgtttcca tttctccccc ttcctcctcg tcctcttctt cttcttcctt ttctcgcgtt tggagagctg atcaggacca gggagccgaa gaatcagcag ccgaggatca gagtggtaga agaaatgggt cgacgaaggc ggaggcaggg atttcaggga ggagtgcttt gtctggggca gagaggaaag gcgaggctaa gagtagggcc ggaggagcat cttcgggtga tagaaagtct gcgaccgctc cgaaacttaa accctttcca attgccagta aagctgcgaa gtcaatacgg aggaagaaga aatctgataa gaatgaggaa ttggtgaaca aagcagtggt tgactttctg gcgaattctg gtgatgaagc tgctttggct ttgacccgca ctgccgagac ttttgggaat cagagctctc tctgggatca ggtattcaac ttggtcatgt ccttcgctag tatcagtcta gaagcgtctc taagaggaga actgtgggct tcagtcaagt cataattaaa acaggaaaca ctgcacttca atgtacctga atgtgccggg tccaaagaat ctggctatag aattgcagag atttgacgag ggagtaacat cacttaaaag tacatctgag tccctttgag atgcgtcaaa gccttgttga ttgccacagt gccgagcgtg atgatttagc gtgcagatgg aattctgcct gtatatttaa gtcaaattgc ccgcctgtca ccccactgtc aacgaattca tcagttccat tcactacccg aatttgatca gataagatat gttgcagtta ttttgtatta tagacagcac tcatgcaaag tgttttgttc agatgatgaa gcagttggag cacagaggtg cgagaggaaa agccttgcaa gtgttccgct tcttgcaggg ccatagtacc tgtgtgttgt ccgagcacaa tcacttgact atcataggaa tcctcggaag agatgggaaa atggcccttg ctagggaaat attcgacggt atgaagggag ctgaaattgc cccgagtgta ctctcttaca cagccttaat ttgtgggtaa gtgcctctgt ccacacatat tgacttggga cctattttga aagtgccaac gatccttctc atttgataat ccttgtggag ggatgtctcc ggaaactact gtgacacaat ctgtatgatt tgaattccac gttaacttat atgagaaaga atctcgctta tctcagagtc gcaaggggtg ggttacattc agccgagatt ggtatagcct tgagttcata atatctttct aacaatgtcc ttgtgtgcac acgggtcatg gcaggtatgc aaagcaaggt ttggtcaaga aggctctgga agtattcagt ctgatgcagt cagaagggtg tagtcccaac attatcacat acaacacaat cattcatgcc tgtgcgaaga gtgaagttgg cttggaaaaa gttgctgggc tctttgagga actgcagatg aaaggattga agcctgatga tattacttac aactctatga tcaatgccta tattagtgga aatctcttgg agaaggcgag tcaagttcta gaagccatgc gaaaagacaa gtacgtaccc aacgttgtaa catacaccag tcttgtaaat gcctacggca aagccggtca gctggagata gctgtggaac tgtttgaaga catgaaaaag aatggctgtg caccaaacac atggacctac aacgccttac tgaaagctta cggaaatgaa ggcctgtatg aaaaagcttc ggttctttac aaggagatgg ggtgtgctgg ttgtgtacct acactttaca ccttcaatac ggtccttgat ttatatggaa ggggagagct gtttgtggag gcggagaatg tgcttgttga tatccaaaag accggcctaa gtcctgatcg ggtagctatt tacctcctct ttcgtgcata tacgttctta ggaggattgt ccagtatata ctcagtacct atataaaatt gtatttaata agttctgatc aaacggtacc aactgagaga atgattttac tttgatcaag cgggagcatt tcattgactc tgtgtcctct gtgcaggtca cgtacaacac gctgatttac tcatacagca aggctggcca tattgggaag gcattggagg ttttggggaa aatgaccaat gatggttgta gacctgacct ttggacatac aatattctgc tcgatgcgac agcgaagcat ggttcaacag aagaggtcat acagttgtac aacgatctga aggaggccgg gcacaaacca aacgtcgtga gctacggcac cttgatcaat atgtacggtc gagcaggcca gtacatggaa gcagaagagg tttgggtgga aatgtgcaaa gctggttgta cgccaaatgt cttcgtgttc tccgcattga tcaacagcta tgcccaacac ggtctgtacg aggtatggtc gcttatgccc tgtcgtccgg actttgaaaa gtgtattgtc attgtcttga ttgacaacaa cttcaagtgt aggaggttca tatttagtgc ccttgaatag acactgcttt aagttcgcag taatcgatcg tagattcact taaaatgtcg agcctctaca gctgcatgaa tgcacggagt gtgtagtcct cgaggatgag agagggatca aggaatcaca tggtcatcag gacgaggaag gagaacaagt tgcaagcaga aaactggacc cagttgtcgt tgcttctgtt agaaagcaaa ctacagtttg atgcaatttt atgcttgatt gttaggccta gccaacgttg ttgtgatgca ttctgtttaa tagattccgt tttgtttcag gaagcgcaaa cggttttcaa tgacatgctg aaggccgggg tgaggcctga cgttaggagc tacactgtac tgatggatgc ttacggtcga gcagggctct gtaatcacat gcagagaata ttggcggaga tggagggcag tggttttgtg cctgactctg tcacttattt tgtcctcgtg cgggcgttca ctaacgcaga aagatggaac gatggacttc agtactacag actcatgtgc cagcaaacaa atctgggcgc ggaaatctct caggatctta tatccgagta tcagaccgag tatgaatttc tcctacagtt gaacaaggaa ggtgtgaagg gttgaggaca tgattcagaa gctacgcttg gatgtcacca agaatttgct gattcctcag ccgaaatcag ggcaaagaat gagcctccta ctacacccgg ggctggtgga tgtctgcatt cctcacacaa ttcatttcag gttgggcatc agaataccat ttgaaatcgt ttgctcaaat acgattgagg tttcgtgttg tgctcaagtc atcgtctccg agttagacat gtctgattgc tctgctgttg aaaccttgtc agacccgtgt gactttcatg tcatagctcc aattgggacg acaacagctc ctcgcttgtg ctgcaaggag caaccggggg atctctatat aaggtctctg gaagagcaga cgggtggacg caccaccaac acacaggaag atttaatatg ttgaatccga tggaaggtgc gtggacgcaa cagaccacgt ttctgacgtc atgtcgctgt cgatctgacg gcatcttgtg ttttctgccc agctgaaagt tcacttctgc catgaaacag actgatcgtg aattggtacc ttgtcatgta gttacgagtc ggctcacgta gtttagtcac ttactatctt tagaggtgaa gttagggttc ggccaggagg agtatagagt cggggatggc tcgaagaacg ttagttcttg gagtcgagcc tggaagcgtt gggagcgtag agtgactttc ccctttgcgt cgacctggat tctccgagtg tggagtgggt tgggcttgac tcatgtttgt gacggtgacg gtttgttgcc agtagggtaa ttgaccgacg ggaattccag tggggaattt cccgtacgtt tcactcgaag aacttgtgac gaagaagttg tgacatttga gtgtgtaatc tctcgcgcct tatatgtgtg tatgtgtgtg cgtatgtgta tgtgagtagc atg |
mRNA UTR + CDS |
| >Mp2g04620.1 acgtgagttt caaggcgctc cagaacctta gcattaatcg agatgagccg ccagtcccaa aatgcggtgc ttcaaaatca gaaagccgga tcgaaagaat tccgggcgag tgcgaagggc acgctcctcc caggcgccag gtcaccctct cggaatttac acgccggaag gcctgccacg tcatgctcat tgcagtaata cgggccccga atcacgccgt cctgcgaact gttgggataa agttactgcg ctcgagaatc cggcgagcgg ccacacagat cgcagatttg gtcggattcg gcccaaatct gcattggcat gtggcgccct cgctcccgcc tccgctctcc agcctccgcc tgcgcctctg cctcttctcc ttcgaggcct tcgatttccc cgcacccgca tgtcgattca ctgaccatca gaccgaccga tcgactgcaa ttggccgcgg gtcgctgctt cgtcggagaa tcgtcgaggc gtggagggga gggcagtgat gatcttgtca tgggctgggc agaatgtgcg gagtgtgtcc ggggcctgcc ctcggagtcc gtcgtggcag gagttggaga ttgtcgccaa ggctgtgagc cttcgtcatg atgatgatga tggtggtggt ggtggtgcac agaaattcag gcggcgcaat gtcgcgcctc cggcttgttc tcggtggtct ctgtctttgg atcaggtgcc ggcgtctgcg tcggtgcgaa gagcggccac ggagcatctc gagagcttgc aggtcgttgt cgaaggcacc cctgtttcca tttctccccc ttcctcctcg tcctcttctt cttcttcctt ttctcgcgtt tggagagctg atcaggacca gggagccgaa gaatcagcag ccgaggatca gagtggtaga agaaatgggt cgacgaaggc ggaggcaggg atttcaggga ggagtgcttt gtctggggca gagaggaaag gcgaggctaa gagtagggcc ggaggagcat cttcgggtga tagaaagtct gcgaccgctc cgaaacttaa accctttcca attgccagta aagctgcgaa gtcaatacgg aggaagaaga aatctgataa gaatgaggaa ttggtgaaca aagcagtggt tgactttctg gcgaattctg gtgatgaagc tgctttggct ttgacccgca ctgccgagac ttttgggaat cagagctctc tctgggatca gatgatgaag cagttggagc acagaggtgc gagaggaaaa gccttgcaag tgttccgctt cttgcagggc catagtacct gtgtgttgtc cgagcacaat cacttgacta tcataggaat cctcggaaga gatgggaaaa tggcccttgc tagggaaata ttcgacggta tgaagggagc tgaaattgcc ccgagtgtac tctcttacac agccttaatt tgtgggtatg caaagcaagg tttggtcaag aaggctctgg aagtattcag tctgatgcag tcagaagggt gtagtcccaa cattatcaca tacaacacaa tcattcatgc ctgtgcgaag agtgaagttg gcttggaaaa agttgctggg ctctttgagg aactgcagat gaaaggattg aagcctgatg atattactta caactctatg atcaatgcct atattagtgg aaatctcttg gagaaggcga gtcaagttct agaagccatg cgaaaagaca agtacgtacc caacgttgta acatacacca gtcttgtaaa tgcctacggc aaagccggtc agctggagat agctgtggaa ctgtttgaag acatgaaaaa gaatggctgt gcaccaaaca catggaccta caacgcctta ctgaaagctt acggaaatga aggcctgtat gaaaaagctt cggttcttta caaggagatg gggtgtgctg gttgtgtacc tacactttac accttcaata cggtccttga tttatatgga aggggagagc tgtttgtgga ggcggagaat gtgcttgttg atatccaaaa gaccggccta agtcctgatc gggtcacgta caacacgctg atttactcat acagcaaggc tggccatatt gggaaggcat tggaggtttt ggggaaaatg accaatgatg gttgtagacc tgacctttgg acatacaata ttctgctcga tgcgacagcg aagcatggtt caacagaaga ggtcatacag ttgtacaacg atctgaagga ggccgggcac aaaccaaacg tcgtgagcta cggcaccttg atcaatatgt acggtcgagc aggccagtac atggaagcag aagaggtttg ggtggaaatg tgcaaagctg gttgtacgcc aaatgtcttc gtgttctccg cattgatcaa cagctatgcc caacacggtc tgtacgagga agcgcaaacg gttttcaatg acatgctgaa ggccggggtg aggcctgacg ttaggagcta cactgtactg atggatgctt acggtcgagc agggctctgt aatcacatgc agagaatatt ggcggagatg gagggcagtg gttttgtgcc tgactctgtc acttattttg tcctcgtgcg ggcgttcact aacgcagaaa gatggaacga tggacttcag tactacagac tcatgtgcca gcaaacaaat ctgggcgcgg aaatctctca ggatcttata tccgagtatc agaccgagta tgaatttctc ctacagttga acaaggaagg tgtgaagggt tgaggacatg attcagaagc tacgcttgga tgtcaccaag aatttgctga ttcctcagcc gaaatcaggg caaagaatga gcctcctact acacccgggg ctggtggatg tctgcattcc tcacacaatt catttcagac ccgtgtgact ttcatgtcat agctccaatt gggacgacaa cagctcctcg cttgtgctgc aaggagcaac cgggggatct ctatataagg tctctggaag agcagacggg tggacgcacc accaacacac aggaagattt aatatgttga atccgatgga aggtgcgtgg acgcaacaga ccacgtttct gacgtcatgt cgctgtcgat ctgacggcat cttgtgtttt ctgcccagct gaaagttcac ttctgccatg aaacagactg atcgtgaatt ggtaccttgt catgtagtta cgagtcggct cacgtagttt agtcacttac tatctttaga ggtgaagtta gggttcggcc aggaggagta tagagtcggg gatggctcga agaacgttag ttcttggagt cgagcctgga agcgttggga gcgtagagtg actttcccct ttgcgtcgac ctggattctc cgagtgtgga gtgggttggg cttgactcat gtttgtgacg gtgacggttt gttgccagta gggtaattga ccgacgggaa ttccagtggg gaatttcccg tacgtttcac tcgaagaact tgtgacgaag aagttgtgac atttgagtgt gtaatctctc gcgccttata tgtgtgtatg tgtgtgcgta tgtgtatgtg agtagcatg |
CDS |
| >Mp2g04620.1 atgatcttgt catgggctgg gcagaatgtg cggagtgtgt ccggggcctg ccctcggagt ccgtcgtggc aggagttgga gattgtcgcc aaggctgtga gccttcgtca tgatgatgat gatggtggtg gtggtggtgc acagaaattc aggcggcgca atgtcgcgcc tccggcttgt tctcggtggt ctctgtcttt ggatcaggtg ccggcgtctg cgtcggtgcg aagagcggcc acggagcatc tcgagagctt gcaggtcgtt gtcgaaggca cccctgtttc catttctccc ccttcctcct cgtcctcttc ttcttcttcc ttttctcgcg tttggagagc tgatcaggac cagggagccg aagaatcagc agccgaggat cagagtggta gaagaaatgg gtcgacgaag gcggaggcag ggatttcagg gaggagtgct ttgtctgggg cagagaggaa aggcgaggct aagagtaggg ccggaggagc atcttcgggt gatagaaagt ctgcgaccgc tccgaaactt aaaccctttc caattgccag taaagctgcg aagtcaatac ggaggaagaa gaaatctgat aagaatgagg aattggtgaa caaagcagtg gttgactttc tggcgaattc tggtgatgaa gctgctttgg ctttgacccg cactgccgag acttttggga atcagagctc tctctgggat cagatgatga agcagttgga gcacagaggt gcgagaggaa aagccttgca agtgttccgc ttcttgcagg gccatagtac ctgtgtgttg tccgagcaca atcacttgac tatcatagga atcctcggaa gagatgggaa aatggccctt gctagggaaa tattcgacgg tatgaaggga gctgaaattg ccccgagtgt actctcttac acagccttaa tttgtgggta tgcaaagcaa ggtttggtca agaaggctct ggaagtattc agtctgatgc agtcagaagg gtgtagtccc aacattatca catacaacac aatcattcat gcctgtgcga agagtgaagt tggcttggaa aaagttgctg ggctctttga ggaactgcag atgaaaggat tgaagcctga tgatattact tacaactcta tgatcaatgc ctatattagt ggaaatctct tggagaaggc gagtcaagtt ctagaagcca tgcgaaaaga caagtacgta cccaacgttg taacatacac cagtcttgta aatgcctacg gcaaagccgg tcagctggag atagctgtgg aactgtttga agacatgaaa aagaatggct gtgcaccaaa cacatggacc tacaacgcct tactgaaagc ttacggaaat gaaggcctgt atgaaaaagc ttcggttctt tacaaggaga tggggtgtgc tggttgtgta cctacacttt acaccttcaa tacggtcctt gatttatatg gaaggggaga gctgtttgtg gaggcggaga atgtgcttgt tgatatccaa aagaccggcc taagtcctga tcgggtcacg tacaacacgc tgatttactc atacagcaag gctggccata ttgggaaggc attggaggtt ttggggaaaa tgaccaatga tggttgtaga cctgaccttt ggacatacaa tattctgctc gatgcgacag cgaagcatgg ttcaacagaa gaggtcatac agttgtacaa cgatctgaag gaggccgggc acaaaccaaa cgtcgtgagc tacggcacct tgatcaatat gtacggtcga gcaggccagt acatggaagc agaagaggtt tgggtggaaa tgtgcaaagc tggttgtacg ccaaatgtct tcgtgttctc cgcattgatc aacagctatg cccaacacgg tctgtacgag gaagcgcaaa cggttttcaa tgacatgctg aaggccgggg tgaggcctga cgttaggagc tacactgtac tgatggatgc ttacggtcga gcagggctct gtaatcacat gcagagaata ttggcggaga tggagggcag tggttttgtg cctgactctg tcacttattt tgtcctcgtg cgggcgttca ctaacgcaga aagatggaac gatggacttc agtactacag actcatgtgc cagcaaacaa atctgggcgc ggaaatctct caggatctta tatccgagta tcagaccgag tatgaatttc tcctacagtt gaacaaggaa ggtgtgaagg gttga |
Protein |
| >Mp2g04620.1 MILSWAGQNV RSVSGACPRS PSWQELEIVA KAVSLRHDDD DGGGGGAQKF RRRNVAPPAC SRWSLSLDQV PASASVRRAA TEHLESLQVV VEGTPVSISP PSSSSSSSSS FSRVWRADQD QGAEESAAED QSGRRNGSTK AEAGISGRSA LSGAERKGEA KSRAGGASSG DRKSATAPKL KPFPIASKAA KSIRRKKKSD KNEELVNKAV VDFLANSGDE AALALTRTAE TFGNQSSLWD QMMKQLEHRG ARGKALQVFR FLQGHSTCVL SEHNHLTIIG ILGRDGKMAL AREIFDGMKG AEIAPSVLSY TALICGYAKQ GLVKKALEVF SLMQSEGCSP NIITYNTIIH ACAKSEVGLE KVAGLFEELQ MKGLKPDDIT YNSMINAYIS GNLLEKASQV LEAMRKDKYV PNVVTYTSLV NAYGKAGQLE IAVELFEDMK KNGCAPNTWT YNALLKAYGN EGLYEKASVL YKEMGCAGCV PTLYTFNTVL DLYGRGELFV EAENVLVDIQ KTGLSPDRVT YNTLIYSYSK AGHIGKALEV LGKMTNDGCR PDLWTYNILL DATAKHGSTE EVIQLYNDLK EAGHKPNVVS YGTLINMYGR AGQYMEAEEV WVEMCKAGCT PNVFVFSALI NSYAQHGLYE EAQTVFNDML KAGVRPDVRS YTVLMDAYGR AGLCNHMQRI LAEMEGSGFV PDSVTYFVLV RAFTNAERWN DGLQYYRLMC QQTNLGAEIS QDLISEYQTE YEFLLQLNKE GVKG |