Mp2g19600



Description

Annotation

Database ID Description
KEGG K08486 STX1B_2_3; syntaxin 1B/2/3
KOG KOG0810 SNARE protein Syntaxin 1 and related proteins; [U]
CDD cd00179 SynN
Pfam PF00804 Syntaxin
Gene3D G3DSA:1.20.58.70 -
SMART SM00397 tSNARE_6
PANTHER PTHR19957 SYNTAXIN
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
PANTHER PTHR19957:SF277 SYNTAXIN OF PLANTS 122 PROTEIN
SMART SM00503 SynN_4
Pfam PF05739 SNARE domain
SUPERFAMILY SSF47661 t-snare proteins
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Coils Coil Coil
CDD cd15848 SNARE_syntaxin1-like
Gene3D G3DSA:1.20.5.110 -
GO GO:0016192 vesicle-mediated transport
GO GO:0005484 SNAP receptor activity
GO GO:0016020 membrane
GO GO:0006886 intracellular protein transport
MapolyID Mapoly0055s0091 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP13B Ortholog of Arabidopsis SYP13 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g19600.1 chr2:21287998..21290018 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.