Mp3g00750



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.10 ""winged helix"" repressor DNA binding domain
TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
Pfam PF04545 Sigma-70, region 4
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04539 Sigma-70 region 3
SUPERFAMILY SSF88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
SUPERFAMILY SSF88946 Sigma2 domain of RNA polymerase sigma factors
CDD cd06171 Sigma70_r4
Coils Coil Coil
PRINTS PR00046 Major sigma-70 factor signature
Pfam PF04542 Sigma-70 region 2
PANTHER PTHR30603 RNA POLYMERASE SIGMA FACTOR RPO
PANTHER PTHR30603:SF45 RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC
Gene3D G3DSA:1.20.120.1810 -
GO GO:0006352 DNA-templated transcription, initiation
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0007s0071 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSIGX Similar gene of Arabidopsis plastid RNA polymerase sigma factor genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00750.1 chr3:974134..979411 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.