Mp3g00750



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.10 ""winged helix"" repressor DNA binding domain
TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
Pfam PF04545 Sigma-70, region 4
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04539 Sigma-70 region 3
SUPERFAMILY SSF88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
SUPERFAMILY SSF88946 Sigma2 domain of RNA polymerase sigma factors
CDD cd06171 Sigma70_r4
Coils Coil Coil
PRINTS PR00046 Major sigma-70 factor signature
Pfam PF04542 Sigma-70 region 2
PANTHER PTHR30603 RNA POLYMERASE SIGMA FACTOR RPO
PANTHER PTHR30603:SF45 RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC
Gene3D G3DSA:1.20.120.1810 -
GO GO:0006352 DNA-templated transcription, initiation
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0007s0071 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSIGX Similar gene of Arabidopsis plastid RNA polymerase sigma factor genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00750.1 chr3:974134..979411 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.