Mp3g06390



Description

Annotation

Database ID Description
KEGG K08505 SFT1; protein transport protein SFT1
KOG KOG3385 V-SNARE; N-term missing; [U]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SUPERFAMILY SSF58038 SNARE fusion complex
CDD cd15841 SNARE_Qc
PANTHER PTHR12791:SF52 TARGET SNARE COILED-COIL DOMAIN PROTEIN
PANTHER PTHR12791 GOLGI SNARE BET1-RELATED
Coils Coil Coil
Gene3D G3DSA:1.20.5.110 -
GO GO:0030173 integral component of Golgi membrane
GO GO:0015031 protein transport
MapolyID Mapoly0006s0109 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSFT1 Ortholog of Arabidopsis SFT1 genes Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06390.1 chr3:6288575..6291431 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g06390.2 chr3:6289633..6291431 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.