Mp3g18380



Description

Annotation

Database ID Description
KEGG K08500 SYP6; syntaxin of plants SYP6
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
Gene3D G3DSA:1.20.5.110 -
SUPERFAMILY SSF47661 t-snare proteins
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF58038 SNARE fusion complex
Gene3D G3DSA:1.20.58.90 -
SMART SM00397 tSNARE_6
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
CDD cd15841 SNARE_Qc
Coils Coil Coil
PANTHER PTHR19957:SF224 SYNTAXIN-61
Pfam PF09177 Syntaxin 6, N-terminal
PANTHER PTHR19957 SYNTAXIN
GO GO:0016192 vesicle-mediated transport
GO GO:0048193 Golgi vesicle transport
GO GO:0016020 membrane
MapolyID Mapoly0140s0004 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP6A Ortholog of Arabidopsis SYP61 gene Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g18380.1 chr3:18670108..18674028 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.