Mp4g11380



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Coils Coil Coil
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
Pfam PF13912 C2H2-type zinc finger
PANTHER PTHR45988 C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED
SMART SM00355 c2h2final6
PANTHER PTHR45988:SF18 C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
GO GO:0003700 DNA-binding transcription factor activity
MapolyID Mapoly0011s0122 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC2H2-3 transcription factor, C2H2-ZnF Published
MpDAZ1 C2H2 Zn-finger transcription factor, ortholog of Arabidopsis thaliana DAZ1 and DAZ2 Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g11380.1 chr4:12542319..12546338 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.