| Database | ID | Description |
|---|---|---|
| KEGG | K11131 | DKC1, NOLA4, CBF5; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] |
| KOG | KOG2529 | Pseudouridine synthase; [J] |
| ProSiteProfiles | PS50890 | PUA domain profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF16198 | tRNA pseudouridylate synthase B C-terminal domain |
| TIGRFAM | TIGR00451 | unchar_dom_2: uncharacterized domain 2 |
| Gene3D | G3DSA:3.30.2350.10 | Pseudouridine synthase |
| Pfam | PF01509 | TruB family pseudouridylate synthase (N terminal domain) |
| PANTHER | PTHR23127:SF0 | H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1 |
| SUPERFAMILY | SSF88697 | PUA domain-like |
| Gene3D | G3DSA:2.30.130.70 | - |
| TIGRFAM | TIGR00425 | CBF5: putative rRNA pseudouridine synthase |
| SMART | SM01136 | DKCLD_2 |
| Pfam | PF01472 | PUA domain |
| PANTHER | PTHR23127 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
| SUPERFAMILY | SSF55120 | Pseudouridine synthase |
| SMART | SM00359 | pua_5 |
| Pfam | PF08068 | DKCLD (NUC011) domain |
| CDD | cd02572 | PseudoU_synth_hDyskerin |
| Coils | Coil | Coil |
| GO | GO:0009982 | pseudouridine synthase activity |
| GO | GO:0001522 | pseudouridine synthesis |
| GO | GO:0003723 | RNA binding |
| GO | GO:0006396 | RNA processing |
| GO | GO:0009451 | RNA modification |
| MapolyID | Mapoly0138s0004 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCBF5 | transcription factor, CBF5 | Published |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g12650.1 gagacttact ggcctctggc gaggttggac atttcgtgcc aacgaggaag aggcaggagg gttttgatgg agacgtgagt ccagcagcga ctcgttcgtg ggtggacctc gagaggaact ggggagaagg aggaagtgag agagaatccg aacgacgagg acggggttct catcgagaat tgctcgcgca aagtaggcaa aatagatata atggcgagcg cggaaaagaa gaagaagaag agagacaagg gagagaaaaa cggggtggag gaggatgggg ccatcgtgac tgcaggtgca gctggtcttg atcaagcgag tatcgatttc ttgatcaagc cccagagttc gacccctgca ttggacacct cgcaatggcc gattttgctc aagaattacg acaagctcaa cattcgaact ggacactata cccccattcc caccgggcat tctccgttga aacggcctct gttcgattac gtacggtacg gtgtgatcaa tctggataag cccgccaacc cttcttccca cgaggtcgtc gcgtggatta ggagaatatt gagggtcgac aagaccggac acagtggtac tttggatccg aaggtcacag gtagtctaat cgtttgtgta gacagggcaa ctcggctcgt gaaagctcaa caaggagctg ggaaggagta cgtttgtgta gctcgccttc actccgcagt cgacaatgtt gccaaggtcg ctcgagctat cgaaaccctg accggtgctt tgttccaaag acctcctctg atttctgccg tgaagaggca gctcaggatt aggacaatct accaaagtaa gttgctggaa tatgacgccg agcgccactt ggtggtgttt tgggtttcct gcgaggcggg aacttacatt agaactttgt gtgttcactt gggattgctt ctaggagtcg ggggccatat gcaggagctg aggcgtgtga ggtcaggtat tctgggagag aaggataatc tggtaacgat gcatgacgtt ttggatgctc aatggcaatt cgatcacaac caggacgaag cttatctcag acgagttatt atgcccctgg aggttctgct gacaagctac aaaaggctgg tcgtgaagga cagtgctgtc aatgccatct gctacggagc caagctgatg attccaggtc tcttacgatt tgagaacgga attgaaaacg gcgaggaggt tgtgctcatg acgaccaagg gcgaggcaat cgcattgggt gtcgctcaga tgaccaccgc cgtaatggcc acctgcgacc acggagtcgt tgccaaggtc aagagagtcg tcatggagag ggacacatat cccaggaaat ggggtttggg acctcgcgca tccacgaaga agaaattgat cgccgatggg ttgctggaca agaatggcag acccaacgag aaaacccccg cagagtggct gaggaacatc cctgagctcg aaaccatcac cgtcgcggcg ggcgaggaca cagcgatcgc gagggcggca gccgtggaag agccttcgac ggcgaagccg aagaaagagg tgaaggtgaa agaagagcct gaagaagcgc gagccggaga gaagaggaaa gtgtcggccg acgtcgcgac cccagagccc gccgcgaaga agaagaagca aaagacggaa gacgccgaag aggtcacgga ggcggtgatg gagacgacga ccccgaagag cgagaagaag aaaaagaaga aggacaagga gcagcacaag gaggaagagg aggaggagaa tggtgcggac gagcccaagt ccgagaagaa gaagaagaag aaggataaat ccgccgattt gacggaggaa ttgacggaga caccgaagag tgagaagaag aagaagaaag ataaatccgc gggtgcggag gagacggctg ctgaggccga ggcgccgaag agcgagaaga agaagaagaa gaagaaagac gaggagttat aggcctcctc gttcggagga gtcggcccga ttggaacata cgtttgaagc atcgcccttc ttgtggaact caatgcacca gttgcaagtg cgagggacct gcatagttat gtggatgcgc aggaggggag tgctccctaa ctttgtaccg ttttactttc gtttactgaa tacacccaat tctagaggga tttcgtaggc gaaaaagatt aggacatgtc gattgttatg acatcgccag ttgtccagct ccatggtcct tgagaggtaa ctgaccccaa gtctcagtga gctgcaatat ctcgccggca gcaccctctc caattttgca gtgttgatta cttgtacaca accaagaaga aaagtgtagt ctgtatgccg tctgtcgttt cgcacagatg tgctgctgtt ttagtttgaa gcatttatcc atgctcaaaa ctgtataaag agtaggtgat ttgtgcacga ctatgcgttc gactgatcgt tcaccaa |
mRNA UTR + CDS |
| >Mp4g12650.1 gagacttact ggcctctggc gaggttggac atttcgtgcc aacgaggaag aggcaggagg gttttgatgg agacgtgagt ccagcagcga ctcgttcgtg ggtggacctc gagaggaact ggggagaagg aggaagtgag agagaatccg aacgacgagg acggggttct catcgagaat tgctcgcgca aagtaggcaa aatagatata atggcgagcg cggaaaagaa gaagaagaag agagacaagg gagagaaaaa cggggtggag gaggatgggg ccatcgtgac tgcaggtgca gctggtcttg atcaagcgag tatcgatttc ttgatcaagc cccagagttc gacccctgca ttggacacct cgcaatggcc gattttgctc aagaattacg acaagctcaa cattcgaact ggacactata cccccattcc caccgggcat tctccgttga aacggcctct gttcgattac gtacggtacg gtgtgatcaa tctggataag cccgccaacc cttcttccca cgaggtcgtc gcgtggatta ggagaatatt gagggtcgac aagaccggac acagtggtac tttggatccg aaggtcacag gtagtctaat cgtttgtgta gacagggcaa ctcggctcgt gaaagctcaa caaggagctg ggaaggagta cgtttgtgta gctcgccttc actccgcagt cgacaatgtt gccaaggtcg ctcgagctat cgaaaccctg accggtgctt tgttccaaag acctcctctg atttctgccg tgaagaggca gctcaggatt aggacaatct accaaagtaa gttgctggaa tatgacgccg agcgccactt ggtggtgttt tgggtttcct gcgaggcggg aacttacatt agaactttgt gtgttcactt gggattgctt ctaggagtcg ggggccatat gcaggagctg aggcgtgtga ggtcaggtat tctgggagag aaggataatc tggtaacgat gcatgacgtt ttggatgctc aatggcaatt cgatcacaac caggacgaag cttatctcag acgagttatt atgcccctgg aggttctgct gacaagctac aaaaggctgg tcgtgaagga cagtgctgtc aatgccatct gctacggagc caagctgatg attccaggtc tcttacgatt tgagaacgga attgaaaacg gcgaggaggt tgtgctcatg acgaccaagg gcgaggcaat cgcattgggt gtcgctcaga tgaccaccgc cgtaatggcc acctgcgacc acggagtcgt tgccaaggtc aagagagtcg tcatggagag ggacacatat cccaggaaat ggggtttggg acctcgcgca tccacgaaga agaaattgat cgccgatggg ttgctggaca agaatggcag acccaacgag aaaacccccg cagagtggct gaggaacatc cctgagctcg aaaccatcac cgtcgcggcg ggcgaggaca cagcgatcgc gagggcggca gccgtggaag agccttcgac ggcgaagccg aagaaagagg tgaaggtgaa agaagagcct gaagaagcgc gagccggaga gaagaggaaa gtgtcggccg acgtcgcgac cccagagccc gccgcgaaga agaagaagca aaagacggaa gacgccgaag aggtcacgga ggcggtgatg gagacgacga ccccgaagag cgagaagaag aaaaagaaga aggacaagga gcagcacaag gaggaagagg aggaggagaa tggtgcggac gagcccaagt ccgagaagaa gaagaagaag aaggataaat ccgccgattt gacggaggaa ttgacggaga caccgaagag tgagaagaag aagaagaaag ataaatccgc gggtgcggag gagacggctg ctgaggccga ggcgccgaag agcgagaaga agaagaagaa gaagaaagac gaggagttat aggcctcctc gttcggagga gtcggcccga ttggaacata cgtttgaagc atcgcccttc ttgtggaact caatgcacca gttgcaagtg cgagggacct gcatagttat gtggatgcgc aggaggggag tgctccctaa ctttgtaccg ttttactttc gtttactgaa tacacccaat tctagaggga tttcgtaggc gaaaaagatt aggacatgtc gattgttatg acatcgccag ttgtccagct ccatggtcct tgagaggtaa ctgaccccaa gtctcagtga gctgcaatat ctcgccggca gcaccctctc caattttgca gtgttgatta cttgtacaca accaagaaga aaagtgtagt ctgtatgccg tctgtcgttt cgcacagatg tgctgctgtt ttagtttgaa gcatttatcc atgctcaaaa ctgtataaag agtaggtgat ttgtgcacga ctatgcgttc gactgatcgt tcaccaa |
CDS |
| >Mp4g12650.1 atggcgagcg cggaaaagaa gaagaagaag agagacaagg gagagaaaaa cggggtggag gaggatgggg ccatcgtgac tgcaggtgca gctggtcttg atcaagcgag tatcgatttc ttgatcaagc cccagagttc gacccctgca ttggacacct cgcaatggcc gattttgctc aagaattacg acaagctcaa cattcgaact ggacactata cccccattcc caccgggcat tctccgttga aacggcctct gttcgattac gtacggtacg gtgtgatcaa tctggataag cccgccaacc cttcttccca cgaggtcgtc gcgtggatta ggagaatatt gagggtcgac aagaccggac acagtggtac tttggatccg aaggtcacag gtagtctaat cgtttgtgta gacagggcaa ctcggctcgt gaaagctcaa caaggagctg ggaaggagta cgtttgtgta gctcgccttc actccgcagt cgacaatgtt gccaaggtcg ctcgagctat cgaaaccctg accggtgctt tgttccaaag acctcctctg atttctgccg tgaagaggca gctcaggatt aggacaatct accaaagtaa gttgctggaa tatgacgccg agcgccactt ggtggtgttt tgggtttcct gcgaggcggg aacttacatt agaactttgt gtgttcactt gggattgctt ctaggagtcg ggggccatat gcaggagctg aggcgtgtga ggtcaggtat tctgggagag aaggataatc tggtaacgat gcatgacgtt ttggatgctc aatggcaatt cgatcacaac caggacgaag cttatctcag acgagttatt atgcccctgg aggttctgct gacaagctac aaaaggctgg tcgtgaagga cagtgctgtc aatgccatct gctacggagc caagctgatg attccaggtc tcttacgatt tgagaacgga attgaaaacg gcgaggaggt tgtgctcatg acgaccaagg gcgaggcaat cgcattgggt gtcgctcaga tgaccaccgc cgtaatggcc acctgcgacc acggagtcgt tgccaaggtc aagagagtcg tcatggagag ggacacatat cccaggaaat ggggtttggg acctcgcgca tccacgaaga agaaattgat cgccgatggg ttgctggaca agaatggcag acccaacgag aaaacccccg cagagtggct gaggaacatc cctgagctcg aaaccatcac cgtcgcggcg ggcgaggaca cagcgatcgc gagggcggca gccgtggaag agccttcgac ggcgaagccg aagaaagagg tgaaggtgaa agaagagcct gaagaagcgc gagccggaga gaagaggaaa gtgtcggccg acgtcgcgac cccagagccc gccgcgaaga agaagaagca aaagacggaa gacgccgaag aggtcacgga ggcggtgatg gagacgacga ccccgaagag cgagaagaag aaaaagaaga aggacaagga gcagcacaag gaggaagagg aggaggagaa tggtgcggac gagcccaagt ccgagaagaa gaagaagaag aaggataaat ccgccgattt gacggaggaa ttgacggaga caccgaagag tgagaagaag aagaagaaag ataaatccgc gggtgcggag gagacggctg ctgaggccga ggcgccgaag agcgagaaga agaagaagaa gaagaaagac gaggagttat ag |
Protein |
| >Mp4g12650.1 MASAEKKKKK RDKGEKNGVE EDGAIVTAGA AGLDQASIDF LIKPQSSTPA LDTSQWPILL KNYDKLNIRT GHYTPIPTGH SPLKRPLFDY VRYGVINLDK PANPSSHEVV AWIRRILRVD KTGHSGTLDP KVTGSLIVCV DRATRLVKAQ QGAGKEYVCV ARLHSAVDNV AKVARAIETL TGALFQRPPL ISAVKRQLRI RTIYQSKLLE YDAERHLVVF WVSCEAGTYI RTLCVHLGLL LGVGGHMQEL RRVRSGILGE KDNLVTMHDV LDAQWQFDHN QDEAYLRRVI MPLEVLLTSY KRLVVKDSAV NAICYGAKLM IPGLLRFENG IENGEEVVLM TTKGEAIALG VAQMTTAVMA TCDHGVVAKV KRVVMERDTY PRKWGLGPRA STKKKLIADG LLDKNGRPNE KTPAEWLRNI PELETITVAA GEDTAIARAA AVEEPSTAKP KKEVKVKEEP EEARAGEKRK VSADVATPEP AAKKKKQKTE DAEEVTEAVM ETTTPKSEKK KKKKDKEQHK EEEEEENGAD EPKSEKKKKK KDKSADLTEE LTETPKSEKK KKKDKSAGAE ETAAEAEAPK SEKKKKKKKD EEL |