| Database | ID | Description |
|---|---|---|
| KEGG | K08486 | STX1B_2_3; syntaxin 1B/2/3 |
| KOG | KOG0810 | SNARE protein Syntaxin 1 and related proteins; [U] |
| SUPERFAMILY | SSF47661 | t-snare proteins |
| SMART | SM00503 | SynN_4 |
| Coils | Coil | Coil |
| PANTHER | PTHR19957:SF80 | SYNTAXIN-121 |
| Pfam | PF00804 | Syntaxin |
| CDD | cd15848 | SNARE_syntaxin1-like |
| ProSiteProfiles | PS50192 | t-SNARE coiled-coil homology domain profile. |
| SMART | SM00397 | tSNARE_6 |
| CDD | cd00179 | SynN |
| Gene3D | G3DSA:1.20.58.70 | - |
| PANTHER | PTHR19957 | SYNTAXIN |
| Pfam | PF05739 | SNARE domain |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0016020 | membrane |
| MapolyID | Mapoly0101s0013 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSYP12B | Common ortholog of both Arabidopsis SYP11 and SYP12 genes | Published |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g20670.1 gtcttctaac tctagagagt gtgacagatg agcacgctgt tgacaagatt aaggtggctt cagcattctt cgttcttaga gttgaaagcc tttgtctttc tttggtttca agctagttgg cttctgtcac gagaactctc agttcctttc gaatacatga cttgagttcc tctatatcag gcttcaatgt tgcggtcctt ctccagtatc cttgcaagtg tatattgtct tccttgtggt tgaatgtatt tatggcgaat acgaacagag agattgacga tgtagtgtct cagctttaat gaaagtgcaa ggtacatgct atgcgtctca tcagtttgag gtttgaaact ctttagcttc tcgtttacga agttgtcagt tctcgatgat tcattgctgg aacgaataaa aatagccttt gggagcatag gagcagtttc atcgcatctt tctctccgat ttgaatcgtc cgtcgggacg agaacaattt atatttgctc cgaccagcaa aaacagttgt atttttcgaa gaattttaca ggtaccagga cacgcttggg tgtttcttct gcatggaaaa tgagatttga aacttgactt cttttctgcg aatgctttct catatagaga atcaaaacaa tatttttttc actggattca agttttaact aattaaaggc ttggaatcat aatcgataat cgagatgatg tccgactact taaaaggaat ttcagctcat gcagaagtaa gtgcagctca ggatctgaca ggatcagaga aattcgttgt cttctataac attgtgcatc agctttgagg ctgtcaatcg tcgtcaagta actgacagat gattttctcc aggttcgagg ttcccttctg ccgacgaaga tccaagtcct ctgagaagtt cttgagaccc acaacaagtc tgcaatactt ttccaaggat ttccggttgc cgaattctac gatgaaactg cgactctgtg cttagcagtc atgaacgatc tgctggcaag agtgttctcc agacgagatg tcgtaccaga tgatgtcgag agaggacccg cagcgtttgc aatggaggaa ggcacaagtt cggaagcagg ggatgagctg tcaggcttct ttcaggaggt cgatacgctc aagaaggaaa tggcaagagt ccgagatctt ctgacaaaat tgcaggacgc acacgaggag agcaaaactg cacggcacac accggcccta caagagctga gagatcggat caacgaagac atcggcgagg tgaccaagac ctccagactc ataaagcagg gcctggagga tctcaacaaa agcaacgctg ccagtcgcga gatcaaaggg tgcgagaaag gcagctccac cgatcggacg aggatccagc tcactaacag cttgacggaa tcgctgaagg atttgatgca tgatttcggc actttgcgca ccaggatcgt cggagagtac cgcgaaatca tcggacggag ctactacaca gtcacaggcc agagggccga tgagaccacg atcgatcgca tggtcgagag cggagagagc gagaccttca tccagagagc catacaagag cagggcaagg gtgaagtgat cgacagtctg cgcgatatcc aagagcagca cgaggctgtc aaggacatcg agaggaatct acaagaacta aaccaaatct tcgtggacct ctcggtgctc gtcgaggcac aaggggcact cgtgaatgac atccagacca acgtcgaacg agcagattcc tacaccaaac gagctgctgt gcatctgcag gtcgccaaga ctcatcagag gaaaaaccgg ctctggatgt gcgccggggt gtctgtcatg ctcatcgccg ctggagttgt ggctgccatc attgcaacgg caaagtgaaa ctctttgtcc cctgggtccc atgacctcca gtcctacatc cgctgttctt tcagccaatt tcttctgaca gtattttcga ctactatcat tcgaaaccag gccccaattt gaaccagggc acccccaccc atcttcagtt tggaatcaga gtctcagaga taaaattagc cagggcttca ttgattcacg acagatttcc tgttcttcat tacactccag agtttctaca tctcaaagag gagtgagtat ctgtacaagc tcctgcaccc gaggaggagg aggaggagta gaagtatctg atccctttgt acaaatttag tagtgaggca aactggcgtt gatgacaata ccttttacaa tctatttaac atggaaagaa atcaagaatt aaattctttc atct |
mRNA UTR + CDS |
| >Mp4g20670.1 gtcttctaac tctagagagt gtgacagatg agcacgctgt tgacaagatt aaggtggctt cagcattctt cgttcttaga gttgaaagcc tttgtctttc tttggtttca agctagttgg cttctgtcac gagaactctc agttcctttc gaatacatga cttgagttcc tctatatcag gcttcaatgt tgcggtcctt ctccagtatc cttgcaagtg tatattgtct tccttgtggt tgaatgtatt tatggcgaat acgaacagag agattgacga tgtagtgtct cagctttaat gaaagtgcaa ggtacatgct atgcgtctca tcagtttgag gtttgaaact ctttagcttc tcgtttacga agttgtcagt tctcgatgat tcattgctgg aacgaataaa aatagccttt gggagcatag gagcagtttc atcgcatctt tctctccgat ttgaatcgtc cgtcgggacg agaacaattt atatttgctc cgaccagcaa aaacagttgt atttttcgaa gaattttaca ggttcgaggt tcccttctgc cgacgaagat ccaagtcctc tgagaagttc ttgagaccca caacaagtct gcaatacttt tccaaggatt tccggttgcc gaattctacg atgaaactgc gactctgtgc ttagcagtca tgaacgatct gctggcaaga gtgttctcca gacgagatgt cgtaccagat gatgtcgaga gaggacccgc agcgtttgca atggaggaag gcacaagttc ggaagcaggg gatgagctgt caggcttctt tcaggaggtc gatacgctca agaaggaaat ggcaagagtc cgagatcttc tgacaaaatt gcaggacgca cacgaggaga gcaaaactgc acggcacaca ccggccctac aagagctgag agatcggatc aacgaagaca tcggcgaggt gaccaagacc tccagactca taaagcaggg cctggaggat ctcaacaaaa gcaacgctgc cagtcgcgag atcaaagggt gcgagaaagg cagctccacc gatcggacga ggatccagct cactaacagc ttgacggaat cgctgaagga tttgatgcat gatttcggca ctttgcgcac caggatcgtc ggagagtacc gcgaaatcat cggacggagc tactacacag tcacaggcca gagggccgat gagaccacga tcgatcgcat ggtcgagagc ggagagagcg agaccttcat ccagagagcc atacaagagc agggcaaggg tgaagtgatc gacagtctgc gcgatatcca agagcagcac gaggctgtca aggacatcga gaggaatcta caagaactaa accaaatctt cgtggacctc tcggtgctcg tcgaggcaca aggggcactc gtgaatgaca tccagaccaa cgtcgaacga gcagattcct acaccaaacg agctgctgtg catctgcagg tcgccaagac tcatcagagg aaaaaccggc tctggatgtg cgccggggtg tctgtcatgc tcatcgccgc tggagttgtg gctgccatca ttgcaacggc aaagtgaaac tctttgtccc ctgggtccca tgacctccag tcctacatcc gctgttcttt cagccaattt cttctgacag tattttcgac tactatcatt cgaaaccagg ccccaatttg aaccagggca cccccaccca tcttcagttt ggaatcagag tctcagagat aaaattagcc agggcttcat tgattcacga cagatttcct gttcttcatt acactccaga gtttctacat ctcaaagagg agtgagtatc tgtacaagct cctgcacccg aggaggagga ggaggagtag aagtatctga tccctttgta caaatttagt agtgaggcaa actggcgttg atgacaatac cttttacaat ctatttaaca tggaaagaaa tcaagaatta aattctttca tct |
CDS |
| >Mp4g20670.1 atgaacgatc tgctggcaag agtgttctcc agacgagatg tcgtaccaga tgatgtcgag agaggacccg cagcgtttgc aatggaggaa ggcacaagtt cggaagcagg ggatgagctg tcaggcttct ttcaggaggt cgatacgctc aagaaggaaa tggcaagagt ccgagatctt ctgacaaaat tgcaggacgc acacgaggag agcaaaactg cacggcacac accggcccta caagagctga gagatcggat caacgaagac atcggcgagg tgaccaagac ctccagactc ataaagcagg gcctggagga tctcaacaaa agcaacgctg ccagtcgcga gatcaaaggg tgcgagaaag gcagctccac cgatcggacg aggatccagc tcactaacag cttgacggaa tcgctgaagg atttgatgca tgatttcggc actttgcgca ccaggatcgt cggagagtac cgcgaaatca tcggacggag ctactacaca gtcacaggcc agagggccga tgagaccacg atcgatcgca tggtcgagag cggagagagc gagaccttca tccagagagc catacaagag cagggcaagg gtgaagtgat cgacagtctg cgcgatatcc aagagcagca cgaggctgtc aaggacatcg agaggaatct acaagaacta aaccaaatct tcgtggacct ctcggtgctc gtcgaggcac aaggggcact cgtgaatgac atccagacca acgtcgaacg agcagattcc tacaccaaac gagctgctgt gcatctgcag gtcgccaaga ctcatcagag gaaaaaccgg ctctggatgt gcgccggggt gtctgtcatg ctcatcgccg ctggagttgt ggctgccatc attgcaacgg caaagtga |
Protein |
| >Mp4g20670.1 MNDLLARVFS RRDVVPDDVE RGPAAFAMEE GTSSEAGDEL SGFFQEVDTL KKEMARVRDL LTKLQDAHEE SKTARHTPAL QELRDRINED IGEVTKTSRL IKQGLEDLNK SNAASREIKG CEKGSSTDRT RIQLTNSLTE SLKDLMHDFG TLRTRIVGEY REIIGRSYYT VTGQRADETT IDRMVESGES ETFIQRAIQE QGKGEVIDSL RDIQEQHEAV KDIERNLQEL NQIFVDLSVL VEAQGALVND IQTNVERADS YTKRAAVHLQ VAKTHQRKNR LWMCAGVSVM LIAAGVVAAI IATAK |