Mp5g07890



Description

Annotation

Database ID Description
KOG KOG2578 Transcription factor E2F/dimerization partner (TDP)-like proteins; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12081:SF7 E2F-LIKE (MAMMALIAN TRANSCRIPTION FACTOR)
SMART SM01372 E2F_TDP_2
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
PANTHER PTHR12081 TRANSCRIPTION FACTOR E2F
Gene3D G3DSA:1.10.10.10 ""winged helix"" repressor DNA binding domain
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0005667 transcription regulator complex
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0198s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDEL2 transcription factor, E2F/DP/DEL Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g07890.1 chr5:8609651..8621443 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g07890.2 chr5:8609651..8621443 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.