Mp5g17400



Description

Annotation

Database ID Description
KEGG K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
KOG KOG0055 Multidrug/pheromone exporter, ABC superfamily; [Q]
CDD cd18578 ABC_6TM_Pgp_ABCB1_D2_like
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF90123 ABC transporter transmembrane region
Pfam PF00664 ABC transporter transmembrane region
Pfam PF00005 ABC transporter
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
ProSitePatterns PS00211 ABC transporters family signature.
Gene3D G3DSA:3.40.50.300 -
CDD cd03249 ABC_MTABC3_MDL1_MDL2
CDD cd18577 ABC_6TM_Pgp_ABCB1_D1_like
SMART SM00382 AAA_5
PANTHER PTHR24221 ATP-BINDING CASSETTE SUB-FAMILY B
PANTHER PTHR24221:SF384 ABC TRANSPORTER B FAMILY MEMBER 19
GO GO:0016021 integral component of membrane
GO GO:0005524 ATP binding
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
MapolyID Mapoly0182s0009 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCB4 Auxin transport Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17400.1 chr5:18463360..18471986 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.