Mp5g17400



Description

Annotation

Database ID Description
KEGG K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
KOG KOG0055 Multidrug/pheromone exporter, ABC superfamily; [Q]
CDD cd18578 ABC_6TM_Pgp_ABCB1_D2_like
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF90123 ABC transporter transmembrane region
Pfam PF00664 ABC transporter transmembrane region
Pfam PF00005 ABC transporter
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
ProSitePatterns PS00211 ABC transporters family signature.
Gene3D G3DSA:3.40.50.300 -
CDD cd03249 ABC_MTABC3_MDL1_MDL2
CDD cd18577 ABC_6TM_Pgp_ABCB1_D1_like
SMART SM00382 AAA_5
PANTHER PTHR24221 ATP-BINDING CASSETTE SUB-FAMILY B
PANTHER PTHR24221:SF384 ABC TRANSPORTER B FAMILY MEMBER 19
GO GO:0016021 integral component of membrane
GO GO:0005524 ATP binding
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
MapolyID Mapoly0182s0009 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCB4 Auxin transport Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17400.1 chr5:18463360..18471986 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.