| Database | ID | Description |
|---|---|---|
| KEGG | K03086 | rpoD; RNA polymerase primary sigma factor |
| PANTHER | PTHR30603:SF14 | RNA POLYMERASE SIGMA FACTOR SIGA |
| TIGRFAM | TIGR02937 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family |
| SUPERFAMILY | SSF88946 | Sigma2 domain of RNA polymerase sigma factors |
| CDD | cd06171 | Sigma70_r4 |
| Pfam | PF04542 | Sigma-70 region 2 |
| SUPERFAMILY | SSF88659 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF04539 | Sigma-70 region 3 |
| Pfam | PF04545 | Sigma-70, region 4 |
| Gene3D | G3DSA:1.10.10.10 | ""winged helix"" repressor DNA binding domain |
| PRINTS | PR00046 | Major sigma-70 factor signature |
| Pfam | PF00140 | Sigma-70 factor, region 1.2 |
| ProSitePatterns | PS00715 | Sigma-70 factors family signature 1. |
| Gene3D | G3DSA:1.10.601.10 | RNA Polymerase Primary Sigma Factor |
| PANTHER | PTHR30603 | RNA POLYMERASE SIGMA FACTOR RPO |
| GO | GO:0016987 | sigma factor activity |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0003677 | DNA binding |
| GO | GO:0006352 | DNA-templated transcription, initiation |
| GO | GO:0006355 | regulation of transcription, DNA-templated |
| MapolyID | Mapoly0009s0187 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSIG1 | Ortholog of Arabidopsis SIG1 gene | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g15030.1 cgtgggggga gtgtgcgacg ggccgagctc tcgaggactc tcgaggactc agactgaaac actgagagac tgagagagct gtggaggcgc aatcgcttcg cagccgagag ctcgttcgat ttcccagatc gcggtctcgc tccgtccttt ctccggctcg tgcccgcgcg cgcattcatt cagtctctaa gcgcttttca ttcggaaatt ctgagtccga tttcggactg gcagctcaat tctggtgctt ttttttttct ctctcttctc tcctctcctc ttctgcctgc cttcctcgtg gaggcgatgg cggggagtgg agcattgctc gtggagtctt tttgagtatg gcattggccc ggtggtgaag aagggaggga gggagggcgg cgaggaaggg tggtgttggt tcgtgctgcg ttgaagtgta ggtgaatggc tatggcagga gtggcggggt ttcaggtggt gattcataag aagcagctgt tctcgacggc gtggaaattg gacgtgcagg agaggctgtg gggaagaggg ggcaagtgtg atgggaatgt gcattattct agacagttgg ggcctagggc agcttcgtcg gccatcaaag ctggcgctga gggatccaat gggagtaaga aggctgcttc taagaaagga tcgtccaagg ctggacgagg agagcccgtg atggcgttca gagatcaggt tgccgtttgt gctctggcct ctgccacttt ggaccgtgct gcggtttctt ctcctcccag aggtagcatt gtgttggatg aaggtgcgag agtggccgcc ccagggcggg aattgtctcc agcaggagat gccgccactt ctctcgagcg ttcccgctta gaatcgcagt ggtcattgtt cctcagtgat gcggtcgaca gacccctccc taatttagag ggtatgggag aggatttcgg cgaggaggta gttgatgtac aggaggagga ctcagctaat ggtttgagtg acgggttgaa ggctgtcaag gtgatcagct ccggaaggcc gtctgctcgt ttacgacgcc tcgaagcgag gcagaggagg ttgtccggcg tagagaagcc gtcgcccatg gaagcattta tgattcaccc gctgaggaaa actgaaagta gcagtaaagc cgataaggcg aagaaaccag agggtgtgca agattatctc tctacatatt tgcgggacat cactaaaatt gatagactga cggccgaaga agagattatg ctctctaaga agatcaggac gggctacatc ctgaaggagg agaggaagaa gtatgattct tagattccca tgcaattatc tgtgagattt gccagctgaa ttatgtgttg gccagtgcat agtcactttg ttctcgaaat tttgaaggac tgaccaatgg ccactcgcag gttcgaaagg gcccttggac accctatcac caaggatcaa tgggctggtc acatgcatat ggctgtcgga gacttagatg ctcagttgca cgaagccgag cttgctaggg acaggatggt gatggcaaat ctgagactgg ttgtttccgt tgtgaagcag tataattgtg aaggacttga agtacctgac ttgatccagg ttcgtcaaac cttctcttgg tctttgcctc tagtctgatg aacctttagt actttacctc tgccaagcca aagtatgaca attcttcata gggggaagtt agaactagtg tcgttgaact ttccgtcagt ggtttcttgg tccttgtgcg atttttttga tttggtctat tggatttaca gactcgaaag tctctgacac tggaacaaat gttggtatgc atatgattct caggagggat caattggact cttaaaagga gtcgagaagt ttgatcacac tcgaggctat aagctgtcca cctatgtcca ctggtggatc cgtcaggtac ttcaattggc cctttcgact tcgaaaatac cgacttgcat tatgcgttga atcagtggag tatttaacga gtattcgctg gtatatttgc agggtgtcac aagagcgatc gccgatcatt ctcggaccgt caggctccct gttcatgtac atgataccct gggccgaatt cgtcgaacaa gagctagaat gctccaagat ggagctcctg caactgtaca ggtgaagatt ctgtcctgtt actgccacta tgcagttcgg gagttgttaa atattaccct tgttgtgtat tccaacaatc attactcctc gaagaaatat ttacttgact tggaagtcgg ttgttgtccg atcctcgtgt ttaacttctg tcttttgaaa aaagttcttc accttaagta ttctcattta gtattactaa gaaactctag cactcatttc acctgttgtg ggtttctttg tgttcagaca ctgtcgaagg ccctcaatct ttccgacaat caagtcaaga atgctttgaa ggtagttcca aattgccttt catccttacg tacggcccat ttacgtcgtt tgacaccata aatttttgca ggcggcgatg ctcaatcgaa gctgatcatt ttttatgatg caggttccta agaagcttaa gtcactcgat atgcaagtgg gtcaccaaaa gagcgttctt actggagaca ctgagacgtt tcatagtgtg agttgttaat ctcgtcctct cgatccgttg ctgccaaatt ctacttgagc tttttatttt tcgttgggaa cgattgtgag tagcagatat gtgcagtaag cttggctctg tatagcagaa acgaggaggt tcttttccct gaatcagttt ctatttttgc agctggttgc tgatcaagat tccgagaatc atccttgggc cgtcgtggag aaggcacata tgaaggtatt gtttgttggt tcgtatattt cgatatctaa aacatgggaa gttttctagc atttgccgat gaaatatgtt tcggcatgtg tatatggctt tctgactgac ctccgttata ttatcacctc tacaggagga cgtcgataag atgctaaaca ctcagctcgg atcaagggaa agggaaatca ttaaaatgca ctatggagtt gactctgtgg atggatatcc aatgtcatta gaaagcatca gccacaggta aactccagac ctgttgaaga gtgccgatct atataagcat ggtataaact catgttttct cagatacatt atcgtttgga cagaatacga atacattgcg gaggccttct tcgttccttc atgccttatt attcacacta gacagaactg aaagccccgg agtcagattg taataaattg tgatgctttt caggtacggt gtttcaagag aacgggttag acagttggag cgagcagcca agcggaagct gcaaacgaca aaccaagggt tagataagta ttgttgcatg tcaatataga gcaactgtac aatatgtcaa tttatacggt cgatcagtgt cagcctatgt catctcgagt aggttgacgg tgtaaagaac caatttgatg tcagcagatg cagctactga tcagaggata acgcagttgc agttgtggtg ttatgaagat gtcatcgagg tgtgtacttt atgttaatat gattgctagt tatgttcagg tgaattcctt ggcattgaga ttcgcaacgt tcaattcagc accttcactg tccagttagt ggaagtgtgg tttcggccta agtgcctgat agagcaatat ctctttttta cttggcactt ggaatgactg ctgaaactaa attgcccacc tgttttccat cgcctgtttg ctaatacgac caatttgatt atatggaatc tac |
mRNA UTR + CDS |
| >Mp7g15030.1 cgtgggggga gtgtgcgacg ggccgagctc tcgaggactc tcgaggactc agactgaaac actgagagac tgagagagct gtggaggcgc aatcgcttcg cagccgagag ctcgttcgat ttcccagatc gcggtctcgc tccgtccttt ctccggctcg tgcccgcgcg cgcattcatt cagtctctaa gcgcttttca ttcggaaatt ctgagtccga tttcggactg gcagctcaat tctggtgctt ttttttttct ctctcttctc tcctctcctc ttctgcctgc cttcctcgtg gaggcgatgg cggggagtgg agcattgctc gtggagtctt tttgagtatg gcattggccc ggtggtgaag aagggaggga gggagggcgg cgaggaaggg tggtgttggt tcgtgctgcg ttgaagtgta ggtgaatggc tatggcagga gtggcggggt ttcaggtggt gattcataag aagcagctgt tctcgacggc gtggaaattg gacgtgcagg agaggctgtg gggaagaggg ggcaagtgtg atgggaatgt gcattattct agacagttgg ggcctagggc agcttcgtcg gccatcaaag ctggcgctga gggatccaat gggagtaaga aggctgcttc taagaaagga tcgtccaagg ctggacgagg agagcccgtg atggcgttca gagatcaggt tgccgtttgt gctctggcct ctgccacttt ggaccgtgct gcggtttctt ctcctcccag aggtagcatt gtgttggatg aaggtgcgag agtggccgcc ccagggcggg aattgtctcc agcaggagat gccgccactt ctctcgagcg ttcccgctta gaatcgcagt ggtcattgtt cctcagtgat gcggtcgaca gacccctccc taatttagag ggtatgggag aggatttcgg cgaggaggta gttgatgtac aggaggagga ctcagctaat ggtttgagtg acgggttgaa ggctgtcaag gtgatcagct ccggaaggcc gtctgctcgt ttacgacgcc tcgaagcgag gcagaggagg ttgtccggcg tagagaagcc gtcgcccatg gaagcattta tgattcaccc gctgaggaaa actgaaagta gcagtaaagc cgataaggcg aagaaaccag agggtgtgca agattatctc tctacatatt tgcgggacat cactaaaatt gatagactga cggccgaaga agagattatg ctctctaaga agatcaggac gggctacatc ctgaaggagg agaggaagaa gttcgaaagg gcccttggac accctatcac caaggatcaa tgggctggtc acatgcatat ggctgtcgga gacttagatg ctcagttgca cgaagccgag cttgctaggg acaggatggt gatggcaaat ctgagactgg ttgtttccgt tgtgaagcag tataattgtg aaggacttga agtacctgac ttgatccagg agggatcaat tggactctta aaaggagtcg agaagtttga tcacactcga ggctataagc tgtccaccta tgtccactgg tggatccgtc agggtgtcac aagagcgatc gccgatcatt ctcggaccgt caggctccct gttcatgtac atgataccct gggccgaatt cgtcgaacaa gagctagaat gctccaagat ggagctcctg caactgtaca gacactgtcg aaggccctca atctttccga caatcaagtc aagaatgctt tgaaggttcc taagaagctt aagtcactcg atatgcaagt gggtcaccaa aagagcgttc ttactggaga cactgagacg tttcatagtc tggttgctga tcaagattcc gagaatcatc cttgggccgt cgtggagaag gcacatatga aggaggacgt cgataagatg ctaaacactc agctcggatc aagggaaagg gaaatcatta aaatgcacta tggagttgac tctgtggatg gatatccaat gtcattagaa agcatcagcc acaggtacgg tgtttcaaga gaacgggtta gacagttgga gcgagcagcc aagcggaagc tgcaaacgac aaaccaaggg ttagataagt attgttgcat gtcaatatag agcaactgta caatatgtca atttatacgg tcgatcagtg tcagcctatg tcatctcgag taggttgacg gtgtaaagaa ccaatttgat gtcagcagat gcagctactg atcagaggat aacgcagttg cagttgtggt gttatgaaga tgtcatcgag gtgtgtactt tatgttaata tgattgctag ttatgttcag gtgaattcct tggcattgag attcgcaacg ttcaattcag caccttcact gtccagttag tggaagtgtg gtttcggcct aagtgcctga tagagcaata tctctttttt acttggcact tggaatgact gctgaaacta aattgcccac ctgttttcca tcgcctgttt gctaatacga ccaatttgat tatatggaat ctac |
CDS |
| >Mp7g15030.1 atggctatgg caggagtggc ggggtttcag gtggtgattc ataagaagca gctgttctcg acggcgtgga aattggacgt gcaggagagg ctgtggggaa gagggggcaa gtgtgatggg aatgtgcatt attctagaca gttggggcct agggcagctt cgtcggccat caaagctggc gctgagggat ccaatgggag taagaaggct gcttctaaga aaggatcgtc caaggctgga cgaggagagc ccgtgatggc gttcagagat caggttgccg tttgtgctct ggcctctgcc actttggacc gtgctgcggt ttcttctcct cccagaggta gcattgtgtt ggatgaaggt gcgagagtgg ccgccccagg gcgggaattg tctccagcag gagatgccgc cacttctctc gagcgttccc gcttagaatc gcagtggtca ttgttcctca gtgatgcggt cgacagaccc ctccctaatt tagagggtat gggagaggat ttcggcgagg aggtagttga tgtacaggag gaggactcag ctaatggttt gagtgacggg ttgaaggctg tcaaggtgat cagctccgga aggccgtctg ctcgtttacg acgcctcgaa gcgaggcaga ggaggttgtc cggcgtagag aagccgtcgc ccatggaagc atttatgatt cacccgctga ggaaaactga aagtagcagt aaagccgata aggcgaagaa accagagggt gtgcaagatt atctctctac atatttgcgg gacatcacta aaattgatag actgacggcc gaagaagaga ttatgctctc taagaagatc aggacgggct acatcctgaa ggaggagagg aagaagttcg aaagggccct tggacaccct atcaccaagg atcaatgggc tggtcacatg catatggctg tcggagactt agatgctcag ttgcacgaag ccgagcttgc tagggacagg atggtgatgg caaatctgag actggttgtt tccgttgtga agcagtataa ttgtgaagga cttgaagtac ctgacttgat ccaggaggga tcaattggac tcttaaaagg agtcgagaag tttgatcaca ctcgaggcta taagctgtcc acctatgtcc actggtggat ccgtcagggt gtcacaagag cgatcgccga tcattctcgg accgtcaggc tccctgttca tgtacatgat accctgggcc gaattcgtcg aacaagagct agaatgctcc aagatggagc tcctgcaact gtacagacac tgtcgaaggc cctcaatctt tccgacaatc aagtcaagaa tgctttgaag gttcctaaga agcttaagtc actcgatatg caagtgggtc accaaaagag cgttcttact ggagacactg agacgtttca tagtctggtt gctgatcaag attccgagaa tcatccttgg gccgtcgtgg agaaggcaca tatgaaggag gacgtcgata agatgctaaa cactcagctc ggatcaaggg aaagggaaat cattaaaatg cactatggag ttgactctgt ggatggatat ccaatgtcat tagaaagcat cagccacagg tacggtgttt caagagaacg ggttagacag ttggagcgag cagccaagcg gaagctgcaa acgacaaacc aagggttaga taagtattgt tgcatgtcaa tatag |
Protein |
| >Mp7g15030.1 MAMAGVAGFQ VVIHKKQLFS TAWKLDVQER LWGRGGKCDG NVHYSRQLGP RAASSAIKAG AEGSNGSKKA ASKKGSSKAG RGEPVMAFRD QVAVCALASA TLDRAAVSSP PRGSIVLDEG ARVAAPGREL SPAGDAATSL ERSRLESQWS LFLSDAVDRP LPNLEGMGED FGEEVVDVQE EDSANGLSDG LKAVKVISSG RPSARLRRLE ARQRRLSGVE KPSPMEAFMI HPLRKTESSS KADKAKKPEG VQDYLSTYLR DITKIDRLTA EEEIMLSKKI RTGYILKEER KKFERALGHP ITKDQWAGHM HMAVGDLDAQ LHEAELARDR MVMANLRLVV SVVKQYNCEG LEVPDLIQEG SIGLLKGVEK FDHTRGYKLS TYVHWWIRQG VTRAIADHSR TVRLPVHVHD TLGRIRRTRA RMLQDGAPAT VQTLSKALNL SDNQVKNALK VPKKLKSLDM QVGHQKSVLT GDTETFHSLV ADQDSENHPW AVVEKAHMKE DVDKMLNTQL GSREREIIKM HYGVDSVDGY PMSLESISHR YGVSRERVRQ LERAAKRKLQ TTNQGLDKYC CMSI |