Mp8g07310



Description

Annotation

Database ID Description
KOG KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain; N-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd16100 ARID
Gene3D G3DSA:1.10.150.60 -
SUPERFAMILY SSF46774 ARID-like
PANTHER PTHR15348 AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
CDD cd06464 ACD_sHsps-like
SMART SM00501 bright_3
PANTHER PTHR15348:SF19 AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE
SMART SM01014 ARID_2
Coils Coil Coil
Gene3D G3DSA:2.60.40.790 -
Pfam PF01388 ARID/BRIGHT DNA binding domain
SUPERFAMILY SSF49764 HSP20-like chaperones
ProSiteProfiles PS51011 ARID domain profile.
ProSiteProfiles PS01031 Small heat shock protein (sHSP) domain profile.
GO GO:0003677 DNA binding
MapolyID Mapoly0013s0062 -

Nomenclature

Gene symbol Product Transcript ID Status
MpARID1 transcription factor, ARID Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g07310.1 chr8:8346443..8355671 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g07310.2 chr8:8346307..8355671 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.