Mp8g09160



Description

Annotation

Database ID Description
KEGG K08518 STXBP5, SRO7_77; syntaxin-binding protein 5
KOG KOG1983 Tomosyn and related SNARE-interacting proteins; [U]
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15873 R-SNARE_STXBP5_6
Gene3D G3DSA:2.130.10.10 -
SUPERFAMILY SSF58038 SNARE fusion complex
PANTHER PTHR10241:SF38 TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
Coils Coil Coil
SMART SM00320 WD40_4
PANTHER PTHR10241 LETHAL 2 GIANT LARVAE PROTEIN
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like
SUPERFAMILY SSF50978 WD40 repeat-like
ProSiteProfiles PS50892 v-SNARE coiled-coil homology domain profile.
Pfam PF00957 Synaptobrevin
Gene3D G3DSA:1.20.5.110 -
GO GO:0016192 vesicle-mediated transport
GO GO:0016021 integral component of membrane
GO GO:0005515 protein binding
MapolyID Mapoly0063s0003 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTOMOSYN11 Ortholog of Arabidopsis TOMOSYN1 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g09160.1 chr8:10452251..10465593 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g09160.2 chr8:10452248..10465593 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.