Mp8g14640



Description

Annotation

Database ID Description
CDD cd11378 DUF296
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00384 AT_hook_2
SUPERFAMILY SSF117856 AF0104/ALDC/Ptd012-like
PANTHER PTHR31500:SF9 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
Pfam PF03479 Plants and Prokaryotes Conserved (PCC) domain
Gene3D G3DSA:3.30.1330.80 Hypothetical protein
ProSiteProfiles PS51742 PPC domain profile profile.
PANTHER PTHR31500 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
PRINTS PR00929 AT-hook-like domain signature
GO GO:0003680 minor groove of adenine-thymine-rich DNA binding
GO GO:0003677 DNA binding
MapolyID Mapoly0151s0042 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATHOOK3 transcription factor, AThook Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14640.1 chr8:16401300..16407091 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g14640.2 chr8:16401300..16407044 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.