Mp8g15260



Description

Annotation

Database ID Description
KOG KOG0811 SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17; [U]
SMART SM00503 SynN_4
CDD cd15840 SNARE_Qa
Pfam PF05739 SNARE domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR19957:SF302 SYNTAXIN OF PLANTS PROTEIN
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
Gene3D G3DSA:1.20.5.110 -
SMART SM00397 tSNARE_6
Pfam PF14523 Syntaxin-like protein
Gene3D G3DSA:1.20.58.70 -
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
PANTHER PTHR19957 SYNTAXIN
SUPERFAMILY SSF47661 t-snare proteins
GO GO:0016192 vesicle-mediated transport
GO GO:0005484 SNAP receptor activity
GO GO:0016020 membrane
GO GO:0006886 intracellular protein transport
MapolyID Mapoly0187s0013 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP2 Ortholog of Arabidopsis SYP2 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15260.1 chr8:17034287..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g15260.2 chr8:17037706..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g15260.3 chr8:17038572..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.