Mp8g15610



Description

Annotation

Database ID Description
KEGG K11649 SMARCC; SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
KOG KOG1279 Chromatin remodeling factor subunit and related transcription factors; [B]
SUPERFAMILY SSF46689 Homeodomain-like
SUPERFAMILY SSF57850 RING/U-box
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS51293 SANT domain profile.
CDD cd00167 SANT
PANTHER PTHR12802 SWI/SNF COMPLEX-RELATED
Pfam PF16495 SWIRM-associated region 1
Pfam PF04433 SWIRM domain
PANTHER PTHR12802:SF61 SWI/SNF COMPLEX SUBUNIT SWI3C
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50934 SWIRM domain profile.
SMART SM00717 sant
Gene3D G3DSA:1.10.10.10 ""winged helix"" repressor DNA binding domain
GO GO:0005515 protein binding
MapolyID Mapoly0079s0052 -

Nomenclature

Gene symbol Product Transcript ID Status
Mp1R-MYB15 transcription factor, MYB Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15610.1 chr8:17568586..17573589 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.