Mp1g04480



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50827 DDT domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
Pfam PF02791 DDT domain
Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
CDD cd00086 homeodomain
Coils Coil Coil
PANTHER PTHR36968 HOMEOBOX-DDT DOMAIN PROTEIN RLT2
SMART SM00389 HOX_1
SMART SM00571 testlast3
ProSiteProfiles PS51913 HARE-type HTH domain profile.
Gene3D G3DSA:1.10.10.60 -
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF00046 Homeodomain
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; C-term missing; [K]
KOG KOG2891 Surface glycoprotein; N-term missing; [R]
KOG KOG4815 Muscular protein implicated in muscular dystrophy phenotype; C-term missing; [R]
KOG KOG1473 Nucleosome remodeling factor, subunit NURF301/BPTF; C-term missing; [BK]
MapolyID Mapoly0005s0159 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 transcription factor, HD, homeodomain protein Published
MpHD1 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04480.1 chr1:4832725..4845506 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.