Mp2g02920



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
CDD cd03249 ABC_MTABC3_MDL1_MDL2
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00005 ABC transporter
ProSitePatterns PS00211 ABC transporters family signature.
CDD cd18577 ABC_6TM_Pgp_ABCB1_D1_like
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
SMART SM00382 AAA_5
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF90123 ABC transporter transmembrane region
CDD cd18578 ABC_6TM_Pgp_ABCB1_D2_like
FunFam G3DSA:3.40.50.300:FF:000251 ABC transporter B family member 19
Gene3D G3DSA:3.40.50.300 -
Pfam PF00664 ABC transporter transmembrane region
FunFam G3DSA:3.40.50.300:FF:000205 ABC transporter B family member 4
PANTHER PTHR24222 ABC TRANSPORTER B FAMILY
KEGG K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
KEGG K17907 autophagy-related protein 9
KOG KOG0055 Multidrug/pheromone exporter, ABC superfamily; [Q]
MapolyID Mapoly0075s0053 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCB1 Auxin transport Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g02920.1 chr2:3739632..3749040 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.