Mp3g06860



Description

Annotation

Database ID Description
Gene3D G3DSA:2.40.50.40 -
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00086 homeodomain
SMART SM00389 HOX_1
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF16719 SAWADEE domain
Gene3D G3DSA:2.30.30.140 -
PANTHER PTHR33827 PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2
KOG KOG2150 CCR4-NOT transcriptional regulation complex, NOT5 subunit; N-term missing; C-term missing; [K]
MapolyID Mapoly0006s0154 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD2 transcription factor, HD, homeodomain protein Published
MpSAWADEE transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06860.1 chr3:7063925..7073524 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.