Mp4g09880



Description

Annotation

Database ID Description
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
FunFam G3DSA:1.10.10.60:FF:000010 Transcriptional activator Myb isoform A
FunFam G3DSA:1.10.10.60:FF:000016 Transcriptional activator Myb isoform A
SMART SM00717 sant
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50090 Myb-like domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
Pfam PF00249 Myb-like DNA-binding domain
PANTHER PTHR45614 MYB PROTEIN-RELATED
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
KOG KOG0049 Transcription factor, Myb superfamily; N-term missing; C-term missing; [K]
MapolyID Mapoly0132s0031 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
Mp3R-MYB4 transcription factor, MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g09880.1 chr4:12731524..12736284 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g09880.2 chr4:12730731..12736284 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g09880.3 chr4:12731361..12736284 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.